Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.92□□□□□ -0.02
PDX1P52945 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.92□□□□□ -0.02
PDX1P52945 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PDX1P52945 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
PDX1P52945 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.92□□□□□ -0.02
PDX1P52945 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PDX1P52945 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PDX1P52945 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PDX1P52945 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PDX1P52945 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDX1P52945 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDX1P52945 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PDX1P52945 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.91□□□□□ -0.02
PDX1P52945 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PDX1P52945 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDX1P52945 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.91□□□□□ -0.02
PDX1P52945 AL138709.1-201ENST00000614840 1693 ntBASIC14.91□□□□□ -0.02
PDX1P52945 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDX1P52945 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDX1P52945 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.91□□□□□ -0.02
PDX1P52945 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PDX1P52945 AC006001.1-201ENST00000325130 474 ntBASIC14.91□□□□□ -0.02
PDX1P52945 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.91□□□□□ -0.02
PDX1P52945 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.91□□□□□ -0.02
PDX1P52945 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.91□□□□□ -0.02
PDX1P52945 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
PDX1P52945 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.91□□□□□ -0.02
PDX1P52945 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.91□□□□□ -0.02
PDX1P52945 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.91□□□□□ -0.02
PDX1P52945 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.91□□□□□ -0.02
PDX1P52945 AC078819.1-201ENST00000547454 765 ntBASIC14.91□□□□□ -0.02
PDX1P52945 AC012085.1-201ENST00000548270 765 ntBASIC14.91□□□□□ -0.02
PDX1P52945 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.91□□□□□ -0.02
PDX1P52945 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.91□□□□□ -0.02
PDX1P52945 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.91□□□□□ -0.02
PDX1P52945 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.91□□□□□ -0.02
PDX1P52945 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PDX1P52945 AC091271.1-201ENST00000611877 1162 ntBASIC14.91□□□□□ -0.02
PDX1P52945 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.91□□□□□ -0.02
PDX1P52945 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.91□□□□□ -0.02
PDX1P52945 AC068587.10-201ENST00000641210 219 ntBASIC14.91□□□□□ -0.02
PDX1P52945 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDX1P52945 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
PDX1P52945 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDX1P52945 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.91□□□□□ -0.02
PDX1P52945 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.91□□□□□ -0.02
PDX1P52945 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
PDX1P52945 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDX1P52945 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PDX1P52945 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PDX1P52945 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PDX1P52945 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDX1P52945 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PDX1P52945 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PDX1P52945 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDX1P52945 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PDX1P52945 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PDX1P52945 CICP13-201ENST00000422015 2789 ntBASIC14.9□□□□□ -0.02
PDX1P52945 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDX1P52945 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.9□□□□□ -0.02
PDX1P52945 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDX1P52945 LINC00554-201ENST00000564841 3011 ntBASIC14.9□□□□□ -0.02
PDX1P52945 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PDX1P52945 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDX1P52945 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PDX1P52945 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDX1P52945 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDX1P52945 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PDX1P52945 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.9□□□□□ -0.02
PDX1P52945 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PDX1P52945 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDX1P52945 MIR326-201ENST00000362220 95 ntBASIC14.9□□□□□ -0.02
PDX1P52945 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PDX1P52945 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
PDX1P52945 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.9□□□□□ -0.02
PDX1P52945 AC006033.1-201ENST00000440505 426 ntBASIC14.9□□□□□ -0.02
PDX1P52945 GOLGA2P4-201ENST00000441462 777 ntBASIC14.9□□□□□ -0.02
PDX1P52945 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.9□□□□□ -0.02
PDX1P52945 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.9□□□□□ -0.02
PDX1P52945 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.9□□□□□ -0.02
PDX1P52945 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.9□□□□□ -0.02
PDX1P52945 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PDX1P52945 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDX1P52945 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.9□□□□□ -0.02
PDX1P52945 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.9□□□□□ -0.02
PDX1P52945 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.9□□□□□ -0.02
PDX1P52945 AC138951.2-201ENST00000623455 1161 ntBASIC14.9□□□□□ -0.02
PDX1P52945 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.9□□□□□ -0.02
PDX1P52945 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
PDX1P52945 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.9□□□□□ -0.02
PDX1P52945 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.9□□□□□ -0.02
PDX1P52945 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PDX1P52945 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PDX1P52945 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.9□□□□□ -0.02
PDX1P52945 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PDX1P52945 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.9□□□□□ -0.02
PDX1P52945 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PDX1P52945 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDX1P52945 AC092384.3-202ENST00000564646 2873 ntBASIC14.9□□□□□ -0.02
PDX1P52945 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms