Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC018442.1-201ENST00000421439 2061 ntBASIC16.09■□□□□ 0.17
SLC1A1P43005 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
SLC1A1P43005 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.09■□□□□ 0.17
SLC1A1P43005 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SLC1A1P43005 AL161772.1-201ENST00000610494 4412 ntBASIC16.08■□□□□ 0.17
SLC1A1P43005 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SLC1A1P43005 OR2I1P-210ENST00000642037 4691 ntBASIC16.08■□□□□ 0.17
SLC1A1P43005 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.08■□□□□ 0.17
SLC1A1P43005 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SLC1A1P43005 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A1P43005 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A1P43005 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A1P43005 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
SLC1A1P43005 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A1P43005 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SLC1A1P43005 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A1P43005 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A1P43005 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A1P43005 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
SLC1A1P43005 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A1P43005 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.08■□□□□ 0.16
SLC1A1P43005 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC1A1P43005 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC1A1P43005 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.08■□□□□ 0.16
SLC1A1P43005 GAPDHP40-201ENST00000505218 1006 ntBASIC16.08■□□□□ 0.16
SLC1A1P43005 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.08■□□□□ 0.16
SLC1A1P43005 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A1P43005 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.08■□□□□ 0.16
SLC1A1P43005 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC1A1P43005 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A1P43005 AL691403.2-201ENST00000618460 490 ntBASIC16.08■□□□□ 0.16
SLC1A1P43005 AL158212.4-201ENST00000624062 1286 ntBASIC16.08■□□□□ 0.16
SLC1A1P43005 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC1A1P43005 AL360270.3-201ENST00000609118 1348 ntBASIC16.08■□□□□ 0.16
SLC1A1P43005 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC1A1P43005 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC1A1P43005 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SLC1A1P43005 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
SLC1A1P43005 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SLC1A1P43005 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A1P43005 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
SLC1A1P43005 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A1P43005 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SLC1A1P43005 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A1P43005 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC1A1P43005 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SLC1A1P43005 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A1P43005 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC1A1P43005 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A1P43005 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC1A1P43005 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A1P43005 AC026748.1-201ENST00000624349 3251 ntBASIC16.07■□□□□ 0.16
SLC1A1P43005 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A1P43005 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC1A1P43005 AC007686.3-201ENST00000619017 3487 ntBASIC16.07■□□□□ 0.16
SLC1A1P43005 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC1A1P43005 AL359258.3-201ENST00000622910 2331 ntBASIC16.07■□□□□ 0.16
SLC1A1P43005 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC1A1P43005 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SLC1A1P43005 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SLC1A1P43005 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A1P43005 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A1P43005 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SLC1A1P43005 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A1P43005 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A1P43005 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC1A1P43005 TREML5P-201ENST00000421694 576 ntBASIC16.07■□□□□ 0.16
SLC1A1P43005 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.07■□□□□ 0.16
SLC1A1P43005 AC241585.1-201ENST00000433527 519 ntBASIC16.07■□□□□ 0.16
SLC1A1P43005 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.07■□□□□ 0.16
SLC1A1P43005 AC009477.1-201ENST00000452936 217 ntBASIC16.07■□□□□ 0.16
SLC1A1P43005 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.07■□□□□ 0.16
SLC1A1P43005 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A1P43005 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC1A1P43005 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.07■□□□□ 0.16
SLC1A1P43005 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.07■□□□□ 0.16
SLC1A1P43005 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.07■□□□□ 0.16
SLC1A1P43005 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC1A1P43005 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.07■□□□□ 0.16
SLC1A1P43005 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A1P43005 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A1P43005 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.07■□□□□ 0.16
SLC1A1P43005 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A1P43005 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A1P43005 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A1P43005 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A1P43005 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A1P43005 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A1P43005 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A1P43005 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A1P43005 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SLC1A1P43005 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SLC1A1P43005 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A1P43005 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A1P43005 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC1A1P43005 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A1P43005 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A1P43005 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SLC1A1P43005 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC1A1P43005 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms