Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HADHAP40939 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.59■□□□□ 0.09
HADHAP40939 MRPS18AP1-201ENST00000414458 589 ntBASIC15.59■□□□□ 0.09
HADHAP40939 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
HADHAP40939 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.59■□□□□ 0.09
HADHAP40939 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.59■□□□□ 0.09
HADHAP40939 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HADHAP40939 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.59■□□□□ 0.09
HADHAP40939 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.59■□□□□ 0.09
HADHAP40939 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HADHAP40939 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.59■□□□□ 0.09
HADHAP40939 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.59■□□□□ 0.09
HADHAP40939 AJ011932.1-201ENST00000621707 465 ntBASIC15.59■□□□□ 0.09
HADHAP40939 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.59■□□□□ 0.09
HADHAP40939 AL390755.1-201ENST00000623716 2027 ntBASIC15.59■□□□□ 0.09
HADHAP40939 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HADHAP40939 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HADHAP40939 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HADHAP40939 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HADHAP40939 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.59■□□□□ 0.09
HADHAP40939 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HADHAP40939 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
HADHAP40939 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HADHAP40939 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
HADHAP40939 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HADHAP40939 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
HADHAP40939 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
HADHAP40939 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
HADHAP40939 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HADHAP40939 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HADHAP40939 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.59■□□□□ 0.09
HADHAP40939 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
HADHAP40939 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
HADHAP40939 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
HADHAP40939 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
HADHAP40939 FGD5P1-202ENST00000614866 2498 ntBASIC15.58■□□□□ 0.09
HADHAP40939 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.58■□□□□ 0.09
HADHAP40939 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.58■□□□□ 0.09
HADHAP40939 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HADHAP40939 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
HADHAP40939 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.58■□□□□ 0.08
HADHAP40939 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HADHAP40939 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.58■□□□□ 0.08
HADHAP40939 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HADHAP40939 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.58■□□□□ 0.08
HADHAP40939 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.58■□□□□ 0.08
HADHAP40939 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.58■□□□□ 0.08
HADHAP40939 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.58■□□□□ 0.08
HADHAP40939 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.58■□□□□ 0.08
HADHAP40939 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.58■□□□□ 0.08
HADHAP40939 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.58■□□□□ 0.08
HADHAP40939 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
HADHAP40939 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.58■□□□□ 0.08
HADHAP40939 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
HADHAP40939 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.58■□□□□ 0.08
HADHAP40939 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
HADHAP40939 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HADHAP40939 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HADHAP40939 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HADHAP40939 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HADHAP40939 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
HADHAP40939 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HADHAP40939 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.58■□□□□ 0.08
HADHAP40939 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HADHAP40939 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HADHAP40939 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HADHAP40939 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HADHAP40939 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.57■□□□□ 0.08
HADHAP40939 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HADHAP40939 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.57■□□□□ 0.08
HADHAP40939 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HADHAP40939 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HADHAP40939 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.57■□□□□ 0.08
HADHAP40939 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HADHAP40939 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HADHAP40939 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HADHAP40939 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HADHAP40939 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
HADHAP40939 C8orf49-201ENST00000525043 1968 ntBASIC15.57■□□□□ 0.08
HADHAP40939 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.57■□□□□ 0.08
HADHAP40939 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HADHAP40939 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HADHAP40939 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HADHAP40939 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.57■□□□□ 0.08
HADHAP40939 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.57■□□□□ 0.08
HADHAP40939 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.57■□□□□ 0.08
HADHAP40939 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.57■□□□□ 0.08
HADHAP40939 MEP1AP4-201ENST00000423244 1087 ntBASIC15.57■□□□□ 0.08
HADHAP40939 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.57■□□□□ 0.08
HADHAP40939 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.57■□□□□ 0.08
HADHAP40939 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HADHAP40939 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.57■□□□□ 0.08
HADHAP40939 AC000095.1-201ENST00000603208 874 ntBASIC15.57■□□□□ 0.08
HADHAP40939 AC009118.2-201ENST00000613275 655 ntBASIC15.57■□□□□ 0.08
HADHAP40939 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HADHAP40939 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HADHAP40939 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HADHAP40939 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.57■□□□□ 0.08
HADHAP40939 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HADHAP40939 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms