Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC19.19■□□□□ 0.66
COL15A1P39059 MIR5572-201ENST00000583188 137 ntBASIC19.19■□□□□ 0.66
COL15A1P39059 AC005324.6-201ENST00000587972 613 ntBASIC19.19■□□□□ 0.66
COL15A1P39059 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL15A1P39059 AL136301.1-201ENST00000615830 422 ntBASIC19.19■□□□□ 0.66
COL15A1P39059 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC19.19■□□□□ 0.66
COL15A1P39059 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC19.19■□□□□ 0.66
COL15A1P39059 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
COL15A1P39059 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL15A1P39059 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL15A1P39059 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
COL15A1P39059 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL15A1P39059 TMBIM7P-203ENST00000641617 1718 ntBASIC19.18■□□□□ 0.66
COL15A1P39059 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL15A1P39059 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC19.18■□□□□ 0.66
COL15A1P39059 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL15A1P39059 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
COL15A1P39059 MST1L-201ENST00000442552 2185 ntBASIC19.18■□□□□ 0.66
COL15A1P39059 AC090340.1-201ENST00000620778 4980 ntBASIC19.18■□□□□ 0.66
COL15A1P39059 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL15A1P39059 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC19.18■□□□□ 0.66
COL15A1P39059 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL15A1P39059 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL15A1P39059 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL15A1P39059 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.18■□□□□ 0.66
COL15A1P39059 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC19.18■□□□□ 0.66
COL15A1P39059 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL15A1P39059 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL15A1P39059 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC19.18■□□□□ 0.66
COL15A1P39059 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
COL15A1P39059 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL15A1P39059 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
COL15A1P39059 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC19.18■□□□□ 0.66
COL15A1P39059 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL15A1P39059 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC19.18■□□□□ 0.66
COL15A1P39059 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC19.18■□□□□ 0.66
COL15A1P39059 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC19.18■□□□□ 0.66
COL15A1P39059 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL15A1P39059 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL15A1P39059 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC19.18■□□□□ 0.66
COL15A1P39059 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC19.18■□□□□ 0.66
COL15A1P39059 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC19.18■□□□□ 0.66
COL15A1P39059 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC19.18■□□□□ 0.66
COL15A1P39059 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC19.18■□□□□ 0.66
COL15A1P39059 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
COL15A1P39059 AC002472.3-201ENST00000640124 621 ntBASIC19.18■□□□□ 0.66
COL15A1P39059 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL15A1P39059 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC19.18■□□□□ 0.66
COL15A1P39059 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL15A1P39059 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
COL15A1P39059 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL15A1P39059 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL15A1P39059 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL15A1P39059 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL15A1P39059 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
COL15A1P39059 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.17■□□□□ 0.66
COL15A1P39059 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
COL15A1P39059 AC112693.3-201ENST00000624819 1983 ntBASIC19.17■□□□□ 0.66
COL15A1P39059 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL15A1P39059 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL15A1P39059 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC19.17■□□□□ 0.66
COL15A1P39059 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.17■□□□□ 0.66
COL15A1P39059 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL15A1P39059 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL15A1P39059 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL15A1P39059 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL15A1P39059 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL15A1P39059 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL15A1P39059 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC19.17■□□□□ 0.66
COL15A1P39059 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL15A1P39059 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL15A1P39059 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL15A1P39059 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
COL15A1P39059 AC009093.2-202ENST00000620513 2079 ntBASIC19.17■□□□□ 0.66
COL15A1P39059 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
COL15A1P39059 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC19.17■□□□□ 0.66
COL15A1P39059 LDHBP1-201ENST00000455730 1119 ntBASIC19.17■□□□□ 0.66
COL15A1P39059 AC012618.1-201ENST00000461223 412 ntBASIC19.17■□□□□ 0.66
COL15A1P39059 CFL1-214ENST00000534769 758 ntTSL 2 BASIC19.17■□□□□ 0.66
COL15A1P39059 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC19.17■□□□□ 0.66
COL15A1P39059 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC19.17■□□□□ 0.66
COL15A1P39059 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC19.17■□□□□ 0.66
COL15A1P39059 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
COL15A1P39059 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL15A1P39059 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC19.17■□□□□ 0.66
COL15A1P39059 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC19.17■□□□□ 0.66
COL15A1P39059 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL15A1P39059 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL15A1P39059 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
COL15A1P39059 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
COL15A1P39059 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL15A1P39059 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL15A1P39059 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL15A1P39059 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL15A1P39059 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL15A1P39059 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL15A1P39059 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC19.16■□□□□ 0.66
COL15A1P39059 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL15A1P39059 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC19.16■□□□□ 0.66
COL15A1P39059 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms