Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.33■□□□□ 0.84
USP6P35125 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC20.33■□□□□ 0.84
USP6P35125 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP6P35125 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP6P35125 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
USP6P35125 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP6P35125 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP6P35125 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP6P35125 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP6P35125 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP6P35125 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
USP6P35125 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP6P35125 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP6P35125 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP6P35125 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC20.32■□□□□ 0.84
USP6P35125 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP6P35125 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC20.32■□□□□ 0.84
USP6P35125 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP6P35125 CICP12-201ENST00000455801 843 ntBASIC20.32■□□□□ 0.84
USP6P35125 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC20.32■□□□□ 0.84
USP6P35125 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC20.32■□□□□ 0.84
USP6P35125 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
USP6P35125 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP6P35125 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC20.32■□□□□ 0.84
USP6P35125 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
USP6P35125 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
USP6P35125 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP6P35125 AC006480.2-201ENST00000609770 1337 ntBASIC20.32■□□□□ 0.84
USP6P35125 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.32■□□□□ 0.84
USP6P35125 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC20.32■□□□□ 0.84
USP6P35125 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP6P35125 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP6P35125 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP6P35125 MROH4P-201ENST00000431302 1578 ntBASIC20.32■□□□□ 0.84
USP6P35125 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP6P35125 PCDHA1-201ENST00000378133 2726 ntBASIC20.32■□□□□ 0.84
USP6P35125 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP6P35125 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP6P35125 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP6P35125 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP6P35125 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP6P35125 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
USP6P35125 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC20.31■□□□□ 0.84
USP6P35125 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP6P35125 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC20.31■□□□□ 0.84
USP6P35125 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC20.31■□□□□ 0.84
USP6P35125 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC20.31■□□□□ 0.84
USP6P35125 AC006122.1-201ENST00000493323 440 ntBASIC20.31■□□□□ 0.84
USP6P35125 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC20.31■□□□□ 0.84
USP6P35125 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC20.31■□□□□ 0.84
USP6P35125 AC012044.1-201ENST00000603431 297 ntBASIC20.31■□□□□ 0.84
USP6P35125 BX088702.1-201ENST00000610784 235 ntBASIC20.31■□□□□ 0.84
USP6P35125 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP6P35125 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP6P35125 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP6P35125 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP6P35125 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC20.31■□□□□ 0.84
USP6P35125 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
USP6P35125 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP6P35125 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP6P35125 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP6P35125 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP6P35125 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP6P35125 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
USP6P35125 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP6P35125 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP6P35125 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC20.3■□□□□ 0.84
USP6P35125 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP6P35125 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
USP6P35125 AC136759.1-202ENST00000530858 2194 ntBASIC20.3■□□□□ 0.84
USP6P35125 REXO1L2P-201ENST00000425429 2069 ntBASIC20.3■□□□□ 0.84
USP6P35125 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC20.3■□□□□ 0.84
USP6P35125 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP6P35125 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP6P35125 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
USP6P35125 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
USP6P35125 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
USP6P35125 IGF1-203ENST00000392904 761 ntTSL 5 BASIC20.3■□□□□ 0.84
USP6P35125 LBH-202ENST00000401506 485 ntTSL 3 BASIC20.3■□□□□ 0.84
USP6P35125 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC20.3■□□□□ 0.84
USP6P35125 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
USP6P35125 AC019193.1-201ENST00000506678 823 ntBASIC20.3■□□□□ 0.84
USP6P35125 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC20.3■□□□□ 0.84
USP6P35125 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC20.3■□□□□ 0.84
USP6P35125 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
USP6P35125 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC20.3■□□□□ 0.84
USP6P35125 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC20.3■□□□□ 0.84
USP6P35125 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC20.3■□□□□ 0.84
USP6P35125 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP6P35125 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP6P35125 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
USP6P35125 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP6P35125 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
USP6P35125 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
USP6P35125 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP6P35125 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.3■□□□□ 0.84
USP6P35125 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
USP6P35125 C18orf15-201ENST00000623680 2534 ntBASIC20.29■□□□□ 0.84
USP6P35125 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
USP6P35125 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms