Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC11.37□□□□□ -0.59
CKS2P33552 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
CKS2P33552 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 APP-205ENST00000358918 2366 ntTSL 5 BASIC11.36□□□□□ -0.59
CKS2P33552 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC11.36□□□□□ -0.59
CKS2P33552 CICP17-201ENST00000418553 2377 ntBASIC11.36□□□□□ -0.59
CKS2P33552 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
CKS2P33552 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
CKS2P33552 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CKS2P33552 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CKS2P33552 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC11.36□□□□□ -0.59
CKS2P33552 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CKS2P33552 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
CKS2P33552 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC11.36□□□□□ -0.59
CKS2P33552 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CKS2P33552 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CKS2P33552 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
CKS2P33552 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
CKS2P33552 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CKS2P33552 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
CKS2P33552 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC11.36□□□□□ -0.59
CKS2P33552 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CKS2P33552 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CKS2P33552 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CKS2P33552 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CKS2P33552 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CKS2P33552 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CKS2P33552 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CKS2P33552 AC004987.2-201ENST00000395959 1148 ntBASIC11.36□□□□□ -0.59
CKS2P33552 AL513480.1-201ENST00000451731 511 ntBASIC11.36□□□□□ -0.59
CKS2P33552 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC11.36□□□□□ -0.59
CKS2P33552 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC11.36□□□□□ -0.59
CKS2P33552 IGHV3-65-201ENST00000523210 341 ntBASIC11.36□□□□□ -0.59
CKS2P33552 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CKS2P33552 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC11.36□□□□□ -0.59
CKS2P33552 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC11.36□□□□□ -0.59
CKS2P33552 AC008608.2-201ENST00000606089 416 ntBASIC11.36□□□□□ -0.59
CKS2P33552 AL732292.2-201ENST00000609649 430 ntBASIC11.36□□□□□ -0.59
CKS2P33552 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC11.36□□□□□ -0.59
CKS2P33552 AC107918.4-202ENST00000641623 219 ntBASIC11.36□□□□□ -0.59
CKS2P33552 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CKS2P33552 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
CKS2P33552 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
CKS2P33552 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CKS2P33552 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CKS2P33552 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CKS2P33552 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
CKS2P33552 SLC9A7P1-202ENST00000556476 2239 ntBASIC11.36□□□□□ -0.59
CKS2P33552 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CKS2P33552 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CKS2P33552 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC11.36□□□□□ -0.59
CKS2P33552 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CKS2P33552 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CKS2P33552 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
CKS2P33552 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
CKS2P33552 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CKS2P33552 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CKS2P33552 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
CKS2P33552 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CKS2P33552 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC11.35□□□□□ -0.59
CKS2P33552 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC11.35□□□□□ -0.59
CKS2P33552 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC11.35□□□□□ -0.59
CKS2P33552 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CKS2P33552 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS2P33552 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
CKS2P33552 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
CKS2P33552 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS2P33552 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS2P33552 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS2P33552 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
CKS2P33552 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC11.35□□□□□ -0.59
CKS2P33552 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC11.35□□□□□ -0.59
CKS2P33552 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS2P33552 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS2P33552 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CKS2P33552 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC11.35□□□□□ -0.59
CKS2P33552 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
CKS2P33552 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS2P33552 AC152010.1-201ENST00000415779 2006 ntBASIC11.35□□□□□ -0.59
CKS2P33552 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
CKS2P33552 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC11.35□□□□□ -0.59
CKS2P33552 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
CKS2P33552 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CKS2P33552 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS2P33552 CICP11-201ENST00000434745 2827 ntBASIC11.35□□□□□ -0.59
CKS2P33552 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC11.35□□□□□ -0.59
CKS2P33552 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC11.35□□□□□ -0.59
CKS2P33552 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CKS2P33552 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CKS2P33552 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CKS2P33552 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC11.35□□□□□ -0.59
CKS2P33552 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC11.35□□□□□ -0.59
CKS2P33552 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS2P33552 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC11.35□□□□□ -0.59
CKS2P33552 FGFR3P6-201ENST00000457012 610 ntBASIC11.35□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms