Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA13P31271 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.41■□□□□ 0.38
HOXA13P31271 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA13P31271 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA13P31271 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA13P31271 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA13P31271 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.41■□□□□ 0.38
HOXA13P31271 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA13P31271 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.41■□□□□ 0.38
HOXA13P31271 MIR1202-201ENST00000408529 83 ntBASIC17.41■□□□□ 0.38
HOXA13P31271 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.41■□□□□ 0.38
HOXA13P31271 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.41■□□□□ 0.38
HOXA13P31271 FAM21FP-201ENST00000426241 1131 ntBASIC17.41■□□□□ 0.38
HOXA13P31271 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.41■□□□□ 0.38
HOXA13P31271 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.41■□□□□ 0.38
HOXA13P31271 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA13P31271 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HOXA13P31271 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA13P31271 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.41■□□□□ 0.38
HOXA13P31271 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.41■□□□□ 0.38
HOXA13P31271 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA13P31271 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA13P31271 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.41■□□□□ 0.38
HOXA13P31271 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA13P31271 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA13P31271 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA13P31271 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA13P31271 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA13P31271 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA13P31271 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA13P31271 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.41■□□□□ 0.38
HOXA13P31271 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA13P31271 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA13P31271 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.41■□□□□ 0.38
HOXA13P31271 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
HOXA13P31271 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA13P31271 PPT1-215ENST00000641471 2368 ntBASIC17.4■□□□□ 0.38
HOXA13P31271 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA13P31271 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA13P31271 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXA13P31271 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXA13P31271 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA13P31271 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA13P31271 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA13P31271 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.4■□□□□ 0.38
HOXA13P31271 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA13P31271 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA13P31271 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA13P31271 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA13P31271 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA13P31271 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
HOXA13P31271 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA13P31271 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA13P31271 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA13P31271 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.4■□□□□ 0.38
HOXA13P31271 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXA13P31271 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA13P31271 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA13P31271 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXA13P31271 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA13P31271 RNA5SP412-201ENST00000516234 123 ntBASIC17.4■□□□□ 0.38
HOXA13P31271 AC022616.1-201ENST00000518688 554 ntBASIC17.4■□□□□ 0.38
HOXA13P31271 AC079316.1-201ENST00000548397 411 ntBASIC17.4■□□□□ 0.38
HOXA13P31271 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA13P31271 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.4■□□□□ 0.38
HOXA13P31271 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.4■□□□□ 0.38
HOXA13P31271 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.4■□□□□ 0.38
HOXA13P31271 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.4■□□□□ 0.38
HOXA13P31271 AC004466.1-201ENST00000599515 1080 ntBASIC17.4■□□□□ 0.38
HOXA13P31271 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXA13P31271 MIR6799-201ENST00000620297 69 ntBASIC17.4■□□□□ 0.38
HOXA13P31271 AC008687.7-202ENST00000637404 953 ntBASIC17.4■□□□□ 0.38
HOXA13P31271 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA13P31271 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA13P31271 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
HOXA13P31271 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
HOXA13P31271 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA13P31271 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA13P31271 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXA13P31271 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXA13P31271 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HOXA13P31271 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HOXA13P31271 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA13P31271 AC055811.4-201ENST00000624039 1754 ntBASIC17.4■□□□□ 0.38
HOXA13P31271 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA13P31271 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA13P31271 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXA13P31271 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.4■□□□□ 0.38
HOXA13P31271 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HOXA13P31271 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.4■□□□□ 0.38
HOXA13P31271 KRT8P44-201ENST00000441609 1350 ntBASIC17.4■□□□□ 0.38
HOXA13P31271 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA13P31271 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.39■□□□□ 0.38
HOXA13P31271 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.39■□□□□ 0.38
HOXA13P31271 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
HOXA13P31271 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
HOXA13P31271 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.39■□□□□ 0.38
HOXA13P31271 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA13P31271 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA13P31271 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms