Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC19.55■□□□□ 0.72
RXRBP28702 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.55■□□□□ 0.72
RXRBP28702 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC19.54■□□□□ 0.72
RXRBP28702 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.54■□□□□ 0.72
RXRBP28702 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC19.54■□□□□ 0.72
RXRBP28702 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RXRBP28702 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
RXRBP28702 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RXRBP28702 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RXRBP28702 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
RXRBP28702 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RXRBP28702 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RXRBP28702 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC19.54■□□□□ 0.72
RXRBP28702 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC19.54■□□□□ 0.72
RXRBP28702 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC19.54■□□□□ 0.72
RXRBP28702 IGHEP2-201ENST00000519308 1256 ntBASIC19.54■□□□□ 0.72
RXRBP28702 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RXRBP28702 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC19.54■□□□□ 0.72
RXRBP28702 HCG18-241ENST00000602290 821 ntTSL 2 BASIC19.54■□□□□ 0.72
RXRBP28702 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC19.54■□□□□ 0.72
RXRBP28702 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RXRBP28702 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.54■□□□□ 0.72
RXRBP28702 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RXRBP28702 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RXRBP28702 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RXRBP28702 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RXRBP28702 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.54■□□□□ 0.72
RXRBP28702 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.54■□□□□ 0.72
RXRBP28702 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RXRBP28702 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RXRBP28702 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.53■□□□□ 0.72
RXRBP28702 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
RXRBP28702 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RXRBP28702 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.53■□□□□ 0.72
RXRBP28702 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RXRBP28702 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RXRBP28702 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
RXRBP28702 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC19.53■□□□□ 0.72
RXRBP28702 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RXRBP28702 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RXRBP28702 FAU-201ENST00000279259 461 ntTSL 2 BASIC19.53■□□□□ 0.72
RXRBP28702 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RXRBP28702 AC092570.1-201ENST00000414446 469 ntBASIC19.53■□□□□ 0.72
RXRBP28702 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RXRBP28702 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RXRBP28702 MAGEA7P-201ENST00000436482 942 ntBASIC19.53■□□□□ 0.72
RXRBP28702 RN7SL530P-201ENST00000485097 298 ntBASIC19.53■□□□□ 0.72
RXRBP28702 RPL18AP8-201ENST00000486071 528 ntBASIC19.53■□□□□ 0.72
RXRBP28702 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RXRBP28702 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC19.53■□□□□ 0.72
RXRBP28702 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.53■□□□□ 0.72
RXRBP28702 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RXRBP28702 AL160191.2-201ENST00000603975 601 ntBASIC19.53■□□□□ 0.72
RXRBP28702 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RXRBP28702 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC19.53■□□□□ 0.72
RXRBP28702 API5-208ENST00000531273 1868 ntTSL 2 BASIC19.53■□□□□ 0.72
RXRBP28702 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.53■□□□□ 0.72
RXRBP28702 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.53■□□□□ 0.72
RXRBP28702 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RXRBP28702 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC19.53■□□□□ 0.72
RXRBP28702 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RXRBP28702 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RXRBP28702 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RXRBP28702 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RXRBP28702 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RXRBP28702 AC084364.1-201ENST00000551967 1556 ntBASIC19.53■□□□□ 0.72
RXRBP28702 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RXRBP28702 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RXRBP28702 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC19.52■□□□□ 0.72
RXRBP28702 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC19.52■□□□□ 0.72
RXRBP28702 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RXRBP28702 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.52■□□□□ 0.72
RXRBP28702 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RXRBP28702 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RXRBP28702 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
RXRBP28702 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC19.52■□□□□ 0.72
RXRBP28702 AC027612.2-202ENST00000445955 1199 ntBASIC19.52■□□□□ 0.72
RXRBP28702 RN7SL288P-201ENST00000490496 291 ntBASIC19.52■□□□□ 0.72
RXRBP28702 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC19.52■□□□□ 0.72
RXRBP28702 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC19.52■□□□□ 0.72
RXRBP28702 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC19.52■□□□□ 0.72
RXRBP28702 KNOP1P1-201ENST00000542108 989 ntBASIC19.52■□□□□ 0.72
RXRBP28702 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC19.52■□□□□ 0.72
RXRBP28702 HNRNPA1P16-201ENST00000575692 955 ntBASIC19.52■□□□□ 0.72
RXRBP28702 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RXRBP28702 ST5-261ENST00000626808 1071 ntTSL 5 BASIC19.52■□□□□ 0.72
RXRBP28702 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC19.52■□□□□ 0.72
RXRBP28702 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
RXRBP28702 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RXRBP28702 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.52■□□□□ 0.72
RXRBP28702 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
RXRBP28702 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
RXRBP28702 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RXRBP28702 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
RXRBP28702 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
RXRBP28702 SIGLEC20P-201ENST00000595243 1311 ntBASIC19.51■□□□□ 0.71
RXRBP28702 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RXRBP28702 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RXRBP28702 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RXRBP28702 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms