Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TNFSF4P23510 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
TNFSF4P23510 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TNFSF4P23510 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TNFSF4P23510 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TNFSF4P23510 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.19□□□□□ -0.3
TNFSF4P23510 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TNFSF4P23510 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TNFSF4P23510 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TNFSF4P23510 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TNFSF4P23510 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
TNFSF4P23510 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.19□□□□□ -0.3
TNFSF4P23510 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TNFSF4P23510 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.18□□□□□ -0.3
TNFSF4P23510 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TNFSF4P23510 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TNFSF4P23510 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.18□□□□□ -0.3
TNFSF4P23510 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TNFSF4P23510 AC007950.2-201ENST00000615045 2347 ntBASIC13.18□□□□□ -0.3
TNFSF4P23510 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TNFSF4P23510 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TNFSF4P23510 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TNFSF4P23510 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TNFSF4P23510 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TNFSF4P23510 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TNFSF4P23510 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.18□□□□□ -0.3
TNFSF4P23510 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TNFSF4P23510 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TNFSF4P23510 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TNFSF4P23510 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.18□□□□□ -0.3
TNFSF4P23510 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.18□□□□□ -0.3
TNFSF4P23510 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TNFSF4P23510 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TNFSF4P23510 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.18□□□□□ -0.3
TNFSF4P23510 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TNFSF4P23510 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.18□□□□□ -0.3
TNFSF4P23510 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.18□□□□□ -0.3
TNFSF4P23510 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.18□□□□□ -0.3
TNFSF4P23510 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.18□□□□□ -0.3
TNFSF4P23510 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TNFSF4P23510 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.18□□□□□ -0.3
TNFSF4P23510 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.18□□□□□ -0.3
TNFSF4P23510 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
TNFSF4P23510 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TNFSF4P23510 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TNFSF4P23510 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.18□□□□□ -0.3
TNFSF4P23510 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TNFSF4P23510 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TNFSF4P23510 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TNFSF4P23510 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TNFSF4P23510 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TNFSF4P23510 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TNFSF4P23510 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TNFSF4P23510 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TNFSF4P23510 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.18□□□□□ -0.3
TNFSF4P23510 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TNFSF4P23510 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.18□□□□□ -0.3
TNFSF4P23510 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TNFSF4P23510 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TNFSF4P23510 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.18□□□□□ -0.3
TNFSF4P23510 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TNFSF4P23510 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.17□□□□□ -0.3
TNFSF4P23510 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
TNFSF4P23510 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.17□□□□□ -0.3
TNFSF4P23510 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TNFSF4P23510 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TNFSF4P23510 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.17□□□□□ -0.3
TNFSF4P23510 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TNFSF4P23510 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TNFSF4P23510 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TNFSF4P23510 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.17□□□□□ -0.3
TNFSF4P23510 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.17□□□□□ -0.3
TNFSF4P23510 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.17□□□□□ -0.3
TNFSF4P23510 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TNFSF4P23510 TMBIM7P-203ENST00000641617 1718 ntBASIC13.17□□□□□ -0.3
TNFSF4P23510 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TNFSF4P23510 KRT8P22-201ENST00000562317 1415 ntBASIC13.17□□□□□ -0.3
TNFSF4P23510 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TNFSF4P23510 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
TNFSF4P23510 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TNFSF4P23510 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.17□□□□□ -0.3
TNFSF4P23510 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
TNFSF4P23510 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.17□□□□□ -0.3
TNFSF4P23510 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.17□□□□□ -0.3
TNFSF4P23510 KRT17P7-201ENST00000451704 1104 ntBASIC13.17□□□□□ -0.3
TNFSF4P23510 ELK1P1-201ENST00000485699 580 ntBASIC13.17□□□□□ -0.3
TNFSF4P23510 ENPP7P5-201ENST00000541031 1031 ntBASIC13.17□□□□□ -0.3
TNFSF4P23510 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.17□□□□□ -0.3
TNFSF4P23510 AC120045.2-201ENST00000567334 178 ntBASIC13.17□□□□□ -0.3
TNFSF4P23510 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.17□□□□□ -0.3
TNFSF4P23510 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
TNFSF4P23510 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.17□□□□□ -0.3
TNFSF4P23510 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.17□□□□□ -0.3
TNFSF4P23510 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TNFSF4P23510 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.17□□□□□ -0.3
TNFSF4P23510 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.17□□□□□ -0.3
TNFSF4P23510 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.17□□□□□ -0.3
TNFSF4P23510 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
TNFSF4P23510 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TNFSF4P23510 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms