Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC18.41■□□□□ 0.54
NCLP19338 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCLP19338 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCLP19338 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC18.41■□□□□ 0.54
NCLP19338 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCLP19338 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.41■□□□□ 0.54
NCLP19338 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCLP19338 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NCLP19338 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCLP19338 REXO1L1P-202ENST00000608646 1974 ntBASIC18.41■□□□□ 0.54
NCLP19338 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCLP19338 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCLP19338 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.41■□□□□ 0.54
NCLP19338 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCLP19338 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCLP19338 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.41■□□□□ 0.54
NCLP19338 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NCLP19338 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
NCLP19338 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.41■□□□□ 0.54
NCLP19338 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.41■□□□□ 0.54
NCLP19338 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
NCLP19338 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.41■□□□□ 0.54
NCLP19338 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.41■□□□□ 0.54
NCLP19338 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.41■□□□□ 0.54
NCLP19338 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.41■□□□□ 0.54
NCLP19338 AC099522.2-201ENST00000607001 744 ntBASIC18.41■□□□□ 0.54
NCLP19338 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC18.41■□□□□ 0.54
NCLP19338 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NCLP19338 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NCLP19338 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NCLP19338 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
NCLP19338 AC127383.1-201ENST00000444697 1800 ntBASIC18.41■□□□□ 0.54
NCLP19338 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCLP19338 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCLP19338 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NCLP19338 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCLP19338 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
NCLP19338 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.41■□□□□ 0.54
NCLP19338 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC18.41■□□□□ 0.54
NCLP19338 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
NCLP19338 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCLP19338 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC18.41■□□□□ 0.54
NCLP19338 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCLP19338 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCLP19338 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCLP19338 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC18.4■□□□□ 0.54
NCLP19338 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
NCLP19338 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
NCLP19338 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCLP19338 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCLP19338 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
NCLP19338 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC18.4■□□□□ 0.54
NCLP19338 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
NCLP19338 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
NCLP19338 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCLP19338 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCLP19338 AJ011931.1-201ENST00000618749 2492 ntBASIC18.4■□□□□ 0.54
NCLP19338 AC079781.5-202ENST00000641784 3743 ntBASIC18.4■□□□□ 0.54
NCLP19338 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC18.4■□□□□ 0.54
NCLP19338 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCLP19338 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
NCLP19338 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
NCLP19338 MROH4P-201ENST00000431302 1578 ntBASIC18.4■□□□□ 0.54
NCLP19338 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.4■□□□□ 0.54
NCLP19338 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCLP19338 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NCLP19338 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.4■□□□□ 0.54
NCLP19338 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
NCLP19338 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NCLP19338 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
NCLP19338 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.4■□□□□ 0.54
NCLP19338 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
NCLP19338 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
NCLP19338 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCLP19338 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC18.4■□□□□ 0.54
NCLP19338 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCLP19338 AC023024.2-201ENST00000623561 1993 ntBASIC18.4■□□□□ 0.54
NCLP19338 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
NCLP19338 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCLP19338 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
NCLP19338 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
NCLP19338 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
NCLP19338 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCLP19338 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
NCLP19338 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC18.4■□□□□ 0.54
NCLP19338 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCLP19338 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NCLP19338 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCLP19338 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCLP19338 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCLP19338 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCLP19338 AL691432.1-201ENST00000596308 1422 ntBASIC18.4■□□□□ 0.54
NCLP19338 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCLP19338 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
NCLP19338 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCLP19338 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NCLP19338 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
NCLP19338 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
NCLP19338 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
NCLP19338 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms