Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.57□□□□□ -0.08
NCK1P16333 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.57□□□□□ -0.08
NCK1P16333 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.57□□□□□ -0.08
NCK1P16333 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NCK1P16333 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.57□□□□□ -0.08
NCK1P16333 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NCK1P16333 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NCK1P16333 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
NCK1P16333 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NCK1P16333 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
NCK1P16333 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NCK1P16333 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NCK1P16333 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NCK1P16333 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
NCK1P16333 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NCK1P16333 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
NCK1P16333 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NCK1P16333 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
NCK1P16333 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NCK1P16333 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
NCK1P16333 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.57□□□□□ -0.08
NCK1P16333 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NCK1P16333 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.57□□□□□ -0.08
NCK1P16333 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.57□□□□□ -0.08
NCK1P16333 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.57□□□□□ -0.08
NCK1P16333 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.57□□□□□ -0.08
NCK1P16333 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.57□□□□□ -0.08
NCK1P16333 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.57□□□□□ -0.08
NCK1P16333 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NCK1P16333 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
NCK1P16333 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NCK1P16333 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NCK1P16333 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.57□□□□□ -0.08
NCK1P16333 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
NCK1P16333 HLA-A-201ENST00000376802 1334 ntBASIC14.57□□□□□ -0.08
NCK1P16333 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NCK1P16333 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NCK1P16333 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NCK1P16333 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NCK1P16333 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NCK1P16333 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
NCK1P16333 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.57□□□□□ -0.08
NCK1P16333 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
NCK1P16333 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NCK1P16333 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.57□□□□□ -0.08
NCK1P16333 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NCK1P16333 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.57□□□□□ -0.08
NCK1P16333 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NCK1P16333 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NCK1P16333 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NCK1P16333 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NCK1P16333 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NCK1P16333 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.57□□□□□ -0.08
NCK1P16333 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
NCK1P16333 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NCK1P16333 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.56□□□□□ -0.08
NCK1P16333 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
NCK1P16333 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.56□□□□□ -0.08
NCK1P16333 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NCK1P16333 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
NCK1P16333 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.56□□□□□ -0.08
NCK1P16333 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.56□□□□□ -0.08
NCK1P16333 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
NCK1P16333 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NCK1P16333 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NCK1P16333 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NCK1P16333 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NCK1P16333 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
NCK1P16333 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NCK1P16333 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NCK1P16333 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.56□□□□□ -0.08
NCK1P16333 KRT8P48-201ENST00000515599 1220 ntBASIC14.56□□□□□ -0.08
NCK1P16333 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.56□□□□□ -0.08
NCK1P16333 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.56□□□□□ -0.08
NCK1P16333 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.56□□□□□ -0.08
NCK1P16333 LINC01225-203ENST00000563550 1244 ntBASIC14.56□□□□□ -0.08
NCK1P16333 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.56□□□□□ -0.08
NCK1P16333 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NCK1P16333 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NCK1P16333 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NCK1P16333 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.56□□□□□ -0.08
NCK1P16333 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NCK1P16333 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NCK1P16333 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NCK1P16333 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
NCK1P16333 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
NCK1P16333 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.56□□□□□ -0.08
NCK1P16333 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NCK1P16333 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.56□□□□□ -0.08
NCK1P16333 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
NCK1P16333 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NCK1P16333 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NCK1P16333 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NCK1P16333 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NCK1P16333 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.55□□□□□ -0.08
NCK1P16333 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
NCK1P16333 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NCK1P16333 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
NCK1P16333 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
NCK1P16333 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms