Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA4P12838 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.59□□□□□ -0.39
DEFA4P12838 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.59□□□□□ -0.39
DEFA4P12838 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.59□□□□□ -0.39
DEFA4P12838 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.59□□□□□ -0.39
DEFA4P12838 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.59□□□□□ -0.39
DEFA4P12838 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC12.59□□□□□ -0.39
DEFA4P12838 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
DEFA4P12838 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA4P12838 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.59□□□□□ -0.39
DEFA4P12838 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.59□□□□□ -0.39
DEFA4P12838 AC010327.4-202ENST00000591484 748 ntBASIC12.59□□□□□ -0.39
DEFA4P12838 AC022145.2-201ENST00000598203 171 ntBASIC12.59□□□□□ -0.39
DEFA4P12838 AC004835.2-201ENST00000603762 682 ntBASIC12.59□□□□□ -0.39
DEFA4P12838 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA4P12838 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA4P12838 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
DEFA4P12838 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.59□□□□□ -0.39
DEFA4P12838 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.59□□□□□ -0.39
DEFA4P12838 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA4P12838 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.59□□□□□ -0.39
DEFA4P12838 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA4P12838 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.59□□□□□ -0.39
DEFA4P12838 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA4P12838 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA4P12838 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA4P12838 AC013726.1-201ENST00000563747 2285 ntBASIC12.59□□□□□ -0.39
DEFA4P12838 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA4P12838 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA4P12838 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA4P12838 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.59□□□□□ -0.39
DEFA4P12838 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA4P12838 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.39
DEFA4P12838 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.58□□□□□ -0.39
DEFA4P12838 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.58□□□□□ -0.39
DEFA4P12838 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
DEFA4P12838 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.58□□□□□ -0.39
DEFA4P12838 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
DEFA4P12838 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
DEFA4P12838 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.58□□□□□ -0.4
DEFA4P12838 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.58□□□□□ -0.4
DEFA4P12838 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA4P12838 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA4P12838 AL031595.1-201ENST00000623969 4709 ntBASIC12.58□□□□□ -0.4
DEFA4P12838 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA4P12838 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA4P12838 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA4P12838 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA4P12838 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.58□□□□□ -0.4
DEFA4P12838 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA4P12838 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA4P12838 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA4P12838 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
DEFA4P12838 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA4P12838 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA4P12838 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA4P12838 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
DEFA4P12838 RPS8P6-201ENST00000426177 609 ntBASIC12.58□□□□□ -0.4
DEFA4P12838 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.58□□□□□ -0.4
DEFA4P12838 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.58□□□□□ -0.4
DEFA4P12838 AL136982.4-201ENST00000437689 1740 ntBASIC12.58□□□□□ -0.4
DEFA4P12838 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA4P12838 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.58□□□□□ -0.4
DEFA4P12838 KRT8P37-201ENST00000451609 1420 ntBASIC12.58□□□□□ -0.4
DEFA4P12838 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12.58□□□□□ -0.4
DEFA4P12838 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.58□□□□□ -0.4
DEFA4P12838 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.58□□□□□ -0.4
DEFA4P12838 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
DEFA4P12838 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.58□□□□□ -0.4
DEFA4P12838 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.58□□□□□ -0.4
DEFA4P12838 AP000344.2-201ENST00000512987 629 ntBASIC12.58□□□□□ -0.4
DEFA4P12838 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.58□□□□□ -0.4
DEFA4P12838 PTENP1-202ENST00000532280 3996 ntBASIC12.58□□□□□ -0.4
DEFA4P12838 ALG1L8P-201ENST00000533887 760 ntBASIC12.58□□□□□ -0.4
DEFA4P12838 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
DEFA4P12838 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA4P12838 AC092865.5-201ENST00000545435 363 ntBASIC12.58□□□□□ -0.4
DEFA4P12838 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA4P12838 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA4P12838 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.58□□□□□ -0.4
DEFA4P12838 AL450472.2-201ENST00000603663 1156 ntBASIC12.58□□□□□ -0.4
DEFA4P12838 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
DEFA4P12838 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.58□□□□□ -0.4
DEFA4P12838 AC003101.2-201ENST00000612557 442 ntBASIC12.58□□□□□ -0.4
DEFA4P12838 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA4P12838 DMBT1P1-203ENST00000636837 4628 ntBASIC12.58□□□□□ -0.4
DEFA4P12838 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA4P12838 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA4P12838 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA4P12838 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA4P12838 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA4P12838 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA4P12838 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
DEFA4P12838 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA4P12838 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA4P12838 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.58□□□□□ -0.4
DEFA4P12838 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.58□□□□□ -0.4
DEFA4P12838 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA4P12838 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC12.57□□□□□ -0.4
DEFA4P12838 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms