Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HOXC6P09630 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.16■□□□□ 0.34
HOXC6P09630 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
HOXC6P09630 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC6P09630 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC6P09630 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC6P09630 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC6P09630 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.15■□□□□ 0.34
HOXC6P09630 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC6P09630 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.15■□□□□ 0.34
HOXC6P09630 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HOXC6P09630 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC6P09630 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC6P09630 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.15■□□□□ 0.34
HOXC6P09630 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC6P09630 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
HOXC6P09630 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC6P09630 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.15■□□□□ 0.34
HOXC6P09630 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.15■□□□□ 0.34
HOXC6P09630 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC17.15■□□□□ 0.34
HOXC6P09630 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC6P09630 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC6P09630 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC17.15■□□□□ 0.34
HOXC6P09630 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC17.15■□□□□ 0.34
HOXC6P09630 AL596276.2-201ENST00000447525 331 ntBASIC17.15■□□□□ 0.34
HOXC6P09630 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
HOXC6P09630 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC6P09630 AC125604.1-201ENST00000496255 707 ntBASIC17.15■□□□□ 0.34
HOXC6P09630 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.15■□□□□ 0.34
HOXC6P09630 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC6P09630 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC6P09630 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.15■□□□□ 0.34
HOXC6P09630 MIR4683-201ENST00000579659 81 ntBASIC17.15■□□□□ 0.34
HOXC6P09630 U62317.3-201ENST00000608319 855 ntBASIC17.15■□□□□ 0.34
HOXC6P09630 AC018635.2-201ENST00000608625 364 ntBASIC17.15■□□□□ 0.34
HOXC6P09630 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.15■□□□□ 0.34
HOXC6P09630 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC6P09630 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.15■□□□□ 0.34
HOXC6P09630 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.15■□□□□ 0.34
HOXC6P09630 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HOXC6P09630 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HOXC6P09630 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HOXC6P09630 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC6P09630 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.15■□□□□ 0.34
HOXC6P09630 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC6P09630 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
HOXC6P09630 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC6P09630 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.15■□□□□ 0.34
HOXC6P09630 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.15■□□□□ 0.34
HOXC6P09630 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC17.15■□□□□ 0.34
HOXC6P09630 AC092978.1-202ENST00000637590 1327 ntBASIC17.15■□□□□ 0.34
HOXC6P09630 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC6P09630 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC6P09630 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
HOXC6P09630 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC6P09630 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.15■□□□□ 0.34
HOXC6P09630 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
HOXC6P09630 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC6P09630 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC6P09630 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC6P09630 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
HOXC6P09630 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC6P09630 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.14■□□□□ 0.33
HOXC6P09630 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC6P09630 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC6P09630 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.14■□□□□ 0.33
HOXC6P09630 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC6P09630 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC6P09630 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC6P09630 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.14■□□□□ 0.33
HOXC6P09630 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC6P09630 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC6P09630 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC6P09630 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC17.14■□□□□ 0.33
HOXC6P09630 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC6P09630 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC6P09630 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.14■□□□□ 0.33
HOXC6P09630 GHSR-202ENST00000427970 912 ntBASIC17.14■□□□□ 0.33
HOXC6P09630 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC17.14■□□□□ 0.33
HOXC6P09630 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC17.14■□□□□ 0.33
HOXC6P09630 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.14■□□□□ 0.33
HOXC6P09630 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC6P09630 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC6P09630 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.14■□□□□ 0.33
HOXC6P09630 AL353770.1-201ENST00000614915 403 ntBASIC17.14■□□□□ 0.33
HOXC6P09630 AL136301.1-201ENST00000615830 422 ntBASIC17.14■□□□□ 0.33
HOXC6P09630 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC6P09630 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
HOXC6P09630 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC6P09630 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC6P09630 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.14■□□□□ 0.33
HOXC6P09630 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.14■□□□□ 0.33
HOXC6P09630 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
HOXC6P09630 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC6P09630 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC6P09630 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC6P09630 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC6P09630 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC6P09630 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXC6P09630 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms