Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.4■□□□□ 0.06
MMP2P08253 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
MMP2P08253 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MMP2P08253 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
MMP2P08253 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
MMP2P08253 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
MMP2P08253 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.4■□□□□ 0.06
MMP2P08253 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.06
MMP2P08253 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP2P08253 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MMP2P08253 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP2P08253 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.39■□□□□ 0.05
MMP2P08253 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
MMP2P08253 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP2P08253 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP2P08253 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.39■□□□□ 0.05
MMP2P08253 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP2P08253 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
MMP2P08253 CICP23-201ENST00000605013 2741 ntBASIC15.39■□□□□ 0.05
MMP2P08253 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
MMP2P08253 FGD5P1-202ENST00000614866 2498 ntBASIC15.39■□□□□ 0.05
MMP2P08253 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP2P08253 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.39■□□□□ 0.05
MMP2P08253 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP2P08253 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.39■□□□□ 0.05
MMP2P08253 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MMP2P08253 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP2P08253 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP2P08253 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP2P08253 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP2P08253 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP2P08253 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.39■□□□□ 0.05
MMP2P08253 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.39■□□□□ 0.05
MMP2P08253 EIF3FP3-201ENST00000434851 1086 ntBASIC15.39■□□□□ 0.05
MMP2P08253 RN7SL752P-201ENST00000463779 287 ntBASIC15.39■□□□□ 0.05
MMP2P08253 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
MMP2P08253 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MMP2P08253 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.39■□□□□ 0.05
MMP2P08253 AC023824.1-201ENST00000562945 2975 ntBASIC15.39■□□□□ 0.05
MMP2P08253 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.39■□□□□ 0.05
MMP2P08253 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
MMP2P08253 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.39■□□□□ 0.05
MMP2P08253 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
MMP2P08253 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
MMP2P08253 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
MMP2P08253 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP2P08253 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
MMP2P08253 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MMP2P08253 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MMP2P08253 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MMP2P08253 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP2P08253 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.39■□□□□ 0.05
MMP2P08253 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP2P08253 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.39■□□□□ 0.05
MMP2P08253 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.39■□□□□ 0.05
MMP2P08253 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP2P08253 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP2P08253 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP2P08253 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP2P08253 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP2P08253 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP2P08253 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP2P08253 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
MMP2P08253 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.38■□□□□ 0.05
MMP2P08253 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.38■□□□□ 0.05
MMP2P08253 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP2P08253 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP2P08253 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP2P08253 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP2P08253 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.38■□□□□ 0.05
MMP2P08253 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MMP2P08253 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.38■□□□□ 0.05
MMP2P08253 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP2P08253 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.38■□□□□ 0.05
MMP2P08253 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP2P08253 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MMP2P08253 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
MMP2P08253 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP2P08253 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
MMP2P08253 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP2P08253 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP2P08253 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP2P08253 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
MMP2P08253 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.38■□□□□ 0.05
MMP2P08253 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.38■□□□□ 0.05
MMP2P08253 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP2P08253 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.38■□□□□ 0.05
MMP2P08253 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
MMP2P08253 COX5BP8-201ENST00000416911 349 ntBASIC15.38■□□□□ 0.05
MMP2P08253 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.38■□□□□ 0.05
MMP2P08253 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.38■□□□□ 0.05
MMP2P08253 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP2P08253 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.38■□□□□ 0.05
MMP2P08253 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.38■□□□□ 0.05
MMP2P08253 COX20P2-201ENST00000452636 358 ntBASIC15.38■□□□□ 0.05
MMP2P08253 INE1-201ENST00000456273 945 ntBASIC15.38■□□□□ 0.05
MMP2P08253 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
MMP2P08253 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.38■□□□□ 0.05
MMP2P08253 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.38■□□□□ 0.05
MMP2P08253 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms