Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CAPNS1P04632 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.32■□□□□ 0.04
CAPNS1P04632 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.32■□□□□ 0.04
CAPNS1P04632 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CAPNS1P04632 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPNS1P04632 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CAPNS1P04632 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.31■□□□□ 0.04
CAPNS1P04632 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.31■□□□□ 0.04
CAPNS1P04632 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CAPNS1P04632 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPNS1P04632 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CAPNS1P04632 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPNS1P04632 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CAPNS1P04632 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPNS1P04632 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.31■□□□□ 0.04
CAPNS1P04632 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
CAPNS1P04632 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPNS1P04632 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
CAPNS1P04632 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.31■□□□□ 0.04
CAPNS1P04632 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.31■□□□□ 0.04
CAPNS1P04632 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.31■□□□□ 0.04
CAPNS1P04632 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPNS1P04632 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CAPNS1P04632 AC091951.1-201ENST00000512854 2465 ntBASIC15.31■□□□□ 0.04
CAPNS1P04632 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPNS1P04632 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CAPNS1P04632 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPNS1P04632 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPNS1P04632 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CAPNS1P04632 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.31■□□□□ 0.04
CAPNS1P04632 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPNS1P04632 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.31■□□□□ 0.04
CAPNS1P04632 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.31■□□□□ 0.04
CAPNS1P04632 BCRP2-202ENST00000447763 634 ntBASIC15.31■□□□□ 0.04
CAPNS1P04632 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.31■□□□□ 0.04
CAPNS1P04632 MPRIPP1-201ENST00000452433 1089 ntBASIC15.31■□□□□ 0.04
CAPNS1P04632 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.31■□□□□ 0.04
CAPNS1P04632 RN7SL399P-201ENST00000471648 279 ntBASIC15.31■□□□□ 0.04
CAPNS1P04632 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.31■□□□□ 0.04
CAPNS1P04632 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.31■□□□□ 0.04
CAPNS1P04632 BCRP6-201ENST00000510112 632 ntBASIC15.31■□□□□ 0.04
CAPNS1P04632 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.31■□□□□ 0.04
CAPNS1P04632 BCRP7-201ENST00000511549 544 ntBASIC15.31■□□□□ 0.04
CAPNS1P04632 AC061975.2-201ENST00000581722 295 ntBASIC15.31■□□□□ 0.04
CAPNS1P04632 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.31■□□□□ 0.04
CAPNS1P04632 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.31■□□□□ 0.04
CAPNS1P04632 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CAPNS1P04632 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CAPNS1P04632 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CAPNS1P04632 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
CAPNS1P04632 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.31■□□□□ 0.04
CAPNS1P04632 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CAPNS1P04632 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.31■□□□□ 0.04
CAPNS1P04632 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPNS1P04632 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPNS1P04632 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CAPNS1P04632 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPNS1P04632 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.31■□□□□ 0.04
CAPNS1P04632 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CAPNS1P04632 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.31■□□□□ 0.04
CAPNS1P04632 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPNS1P04632 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPNS1P04632 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.31■□□□□ 0.04
CAPNS1P04632 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CAPNS1P04632 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPNS1P04632 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPNS1P04632 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPNS1P04632 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.31■□□□□ 0.04
CAPNS1P04632 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPNS1P04632 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CAPNS1P04632 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPNS1P04632 AC092127.1-201ENST00000567093 3455 ntBASIC15.3■□□□□ 0.04
CAPNS1P04632 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPNS1P04632 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPNS1P04632 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPNS1P04632 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAPNS1P04632 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPNS1P04632 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.3■□□□□ 0.04
CAPNS1P04632 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAPNS1P04632 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPNS1P04632 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.3■□□□□ 0.04
CAPNS1P04632 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CAPNS1P04632 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.3■□□□□ 0.04
CAPNS1P04632 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPNS1P04632 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPNS1P04632 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CAPNS1P04632 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAPNS1P04632 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CAPNS1P04632 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CAPNS1P04632 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAPNS1P04632 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAPNS1P04632 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.3■□□□□ 0.04
CAPNS1P04632 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CAPNS1P04632 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAPNS1P04632 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CAPNS1P04632 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.3■□□□□ 0.04
CAPNS1P04632 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.3■□□□□ 0.04
CAPNS1P04632 AP001889.1-201ENST00000525414 633 ntBASIC15.3■□□□□ 0.04
CAPNS1P04632 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.3■□□□□ 0.04
CAPNS1P04632 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms