Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 TMBIM7P-202ENST00000641474 1516 ntBASIC9.25□□□□□ -0.93
APOBP04114 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC9.25□□□□□ -0.93
APOBP04114 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC9.25□□□□□ -0.93
APOBP04114 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC9.25□□□□□ -0.93
APOBP04114 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC9.25□□□□□ -0.93
APOBP04114 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC9.25□□□□□ -0.93
APOBP04114 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC9.25□□□□□ -0.93
APOBP04114 HNRNPA1P58-201ENST00000403629 610 ntBASIC9.25□□□□□ -0.93
APOBP04114 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC9.25□□□□□ -0.93
APOBP04114 RPSAP15-201ENST00000448168 861 ntBASIC9.25□□□□□ -0.93
APOBP04114 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC9.25□□□□□ -0.93
APOBP04114 AC006483.2-201ENST00000609813 515 ntBASIC9.25□□□□□ -0.93
APOBP04114 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
APOBP04114 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
APOBP04114 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
APOBP04114 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
APOBP04114 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
APOBP04114 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
APOBP04114 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
APOBP04114 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC9.25□□□□□ -0.93
APOBP04114 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC9.25□□□□□ -0.93
APOBP04114 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
APOBP04114 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC9.25□□□□□ -0.93
APOBP04114 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC9.25□□□□□ -0.93
APOBP04114 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
APOBP04114 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
APOBP04114 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
APOBP04114 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC9.25□□□□□ -0.93
APOBP04114 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
APOBP04114 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
APOBP04114 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
APOBP04114 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
APOBP04114 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
APOBP04114 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
APOBP04114 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
APOBP04114 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
APOBP04114 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
APOBP04114 RN7SL494P-201ENST00000461517 304 ntBASIC9.25□□□□□ -0.93
APOBP04114 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
APOBP04114 PPIA-208ENST00000489459 907 ntTSL 2 BASIC9.25□□□□□ -0.93
APOBP04114 RNA5SP417-201ENST00000516459 108 ntBASIC9.25□□□□□ -0.93
APOBP04114 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
APOBP04114 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
APOBP04114 AC093752.3-201ENST00000567343 901 ntBASIC9.25□□□□□ -0.93
APOBP04114 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC9.25□□□□□ -0.93
APOBP04114 PPIA-210ENST00000620047 827 ntTSL 5 BASIC9.25□□□□□ -0.93
APOBP04114 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC9.25□□□□□ -0.93
APOBP04114 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC9.25□□□□□ -0.93
APOBP04114 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
APOBP04114 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC9.25□□□□□ -0.93
APOBP04114 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
APOBP04114 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
APOBP04114 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
APOBP04114 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC9.24□□□□□ -0.93
APOBP04114 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC9.24□□□□□ -0.93
APOBP04114 RGS5-216ENST00000449680 788 ntTSL 3 BASIC9.24□□□□□ -0.93
APOBP04114 CHCHD2P9-201ENST00000461726 456 ntBASIC9.24□□□□□ -0.93
APOBP04114 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC9.24□□□□□ -0.93
APOBP04114 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC9.24□□□□□ -0.93
APOBP04114 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC9.24□□□□□ -0.93
APOBP04114 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
APOBP04114 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC9.24□□□□□ -0.93
APOBP04114 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
APOBP04114 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC9.24□□□□□ -0.93
APOBP04114 FAS-202ENST00000352159 1722 ntTSL 5 BASIC9.24□□□□□ -0.93
APOBP04114 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
APOBP04114 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
APOBP04114 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC9.24□□□□□ -0.93
APOBP04114 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
APOBP04114 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
APOBP04114 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC9.24□□□□□ -0.93
APOBP04114 AP000845.1-201ENST00000581677 2131 ntBASIC9.24□□□□□ -0.93
APOBP04114 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
APOBP04114 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
APOBP04114 MBP-201ENST00000354542 575 ntTSL 2 BASIC9.24□□□□□ -0.93
APOBP04114 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
APOBP04114 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
APOBP04114 ALG3P1-201ENST00000508806 1114 ntBASIC9.24□□□□□ -0.93
APOBP04114 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC9.24□□□□□ -0.93
APOBP04114 PMEL-214ENST00000550447 901 ntTSL 3 BASIC9.24□□□□□ -0.93
APOBP04114 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC9.24□□□□□ -0.93
APOBP04114 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
APOBP04114 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
APOBP04114 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
APOBP04114 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC9.24□□□□□ -0.93
APOBP04114 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
APOBP04114 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
APOBP04114 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
APOBP04114 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
APOBP04114 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC9.24□□□□□ -0.93
APOBP04114 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
APOBP04114 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC9.24□□□□□ -0.93
APOBP04114 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
APOBP04114 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
APOBP04114 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
APOBP04114 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
APOBP04114 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC9.24□□□□□ -0.93
APOBP04114 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC9.24□□□□□ -0.93
APOBP04114 FOXN3-AS2-201ENST00000554071 1262 ntBASIC9.24□□□□□ -0.93
APOBP04114 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC9.24□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms