Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC11.63□□□□□ -0.55
HLA-DQA1P01909 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 AC023090.2-201ENST00000625182 2110 ntBASIC11.62□□□□□ -0.55
HLA-DQA1P01909 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 PRYP5-201ENST00000451909 266 ntBASIC11.62□□□□□ -0.55
HLA-DQA1P01909 KRT16P4-201ENST00000453883 522 ntBASIC11.62□□□□□ -0.55
HLA-DQA1P01909 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 SLC25A6P2-201ENST00000497974 877 ntBASIC11.62□□□□□ -0.55
HLA-DQA1P01909 MIR5100-201ENST00000579544 119 ntBASIC11.62□□□□□ -0.55
HLA-DQA1P01909 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 AC012313.10-201ENST00000623509 926 ntBASIC11.62□□□□□ -0.55
HLA-DQA1P01909 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 AC018529.2-202ENST00000611482 3087 ntBASIC11.62□□□□□ -0.55
HLA-DQA1P01909 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
HLA-DQA1P01909 AC055811.4-201ENST00000624039 1754 ntBASIC11.62□□□□□ -0.55
HLA-DQA1P01909 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 MIR193BHG-211ENST00000641433 5365 ntBASIC11.61□□□□□ -0.55
HLA-DQA1P01909 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 PI4KAP1-204ENST00000612579 1703 ntBASIC11.61□□□□□ -0.55
HLA-DQA1P01909 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 IPPK-202ENST00000375522 882 ntTSL 3 BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 AP002469.2-201ENST00000531724 424 ntBASIC11.61□□□□□ -0.55
HLA-DQA1P01909 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 AC091304.2-201ENST00000564639 760 ntBASIC11.61□□□□□ -0.55
HLA-DQA1P01909 CLEC4GP1-201ENST00000596555 870 ntBASIC11.61□□□□□ -0.55
HLA-DQA1P01909 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms