Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TRBV12-3P01733 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TRBV12-3P01733 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRBV12-3P01733 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
TRBV12-3P01733 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
TRBV12-3P01733 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRBV12-3P01733 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC11.87□□□□□ -0.51
TRBV12-3P01733 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC11.87□□□□□ -0.51
TRBV12-3P01733 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
TRBV12-3P01733 GSN-215ENST00000545652 2428 ntTSL 2 BASIC11.87□□□□□ -0.51
TRBV12-3P01733 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
TRBV12-3P01733 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRBV12-3P01733 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TRBV12-3P01733 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC11.87□□□□□ -0.51
TRBV12-3P01733 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRBV12-3P01733 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TRBV12-3P01733 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRBV12-3P01733 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRBV12-3P01733 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC11.87□□□□□ -0.51
TRBV12-3P01733 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
TRBV12-3P01733 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC11.87□□□□□ -0.51
TRBV12-3P01733 GHSR-202ENST00000427970 912 ntBASIC11.87□□□□□ -0.51
TRBV12-3P01733 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
TRBV12-3P01733 PTPA-220ENST00000436883 532 ntTSL 4 BASIC11.87□□□□□ -0.51
TRBV12-3P01733 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC11.87□□□□□ -0.51
TRBV12-3P01733 RN7SL752P-201ENST00000463779 287 ntBASIC11.87□□□□□ -0.51
TRBV12-3P01733 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TRBV12-3P01733 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC11.87□□□□□ -0.51
TRBV12-3P01733 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
TRBV12-3P01733 POLE2-203ENST00000553805 496 ntTSL 2 BASIC11.87□□□□□ -0.51
TRBV12-3P01733 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC11.87□□□□□ -0.51
TRBV12-3P01733 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC11.87□□□□□ -0.51
TRBV12-3P01733 SAMD11P1-201ENST00000571429 661 ntBASIC11.87□□□□□ -0.51
TRBV12-3P01733 CECR7-204ENST00000609932 568 ntTSL 2 BASIC11.87□□□□□ -0.51
TRBV12-3P01733 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
TRBV12-3P01733 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TRBV12-3P01733 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRBV12-3P01733 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRBV12-3P01733 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TRBV12-3P01733 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC11.87□□□□□ -0.51
TRBV12-3P01733 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
TRBV12-3P01733 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
TRBV12-3P01733 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC11.87□□□□□ -0.51
TRBV12-3P01733 AP000845.1-201ENST00000581677 2131 ntBASIC11.87□□□□□ -0.51
TRBV12-3P01733 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC11.87□□□□□ -0.51
TRBV12-3P01733 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TRBV12-3P01733 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRBV12-3P01733 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRBV12-3P01733 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
TRBV12-3P01733 USE1-206ENST00000595101 1776 ntTSL 2 BASIC11.87□□□□□ -0.51
TRBV12-3P01733 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TRBV12-3P01733 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC11.87□□□□□ -0.51
TRBV12-3P01733 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC11.87□□□□□ -0.51
TRBV12-3P01733 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRBV12-3P01733 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
TRBV12-3P01733 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TRBV12-3P01733 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRBV12-3P01733 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRBV12-3P01733 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC11.86□□□□□ -0.51
TRBV12-3P01733 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRBV12-3P01733 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC11.86□□□□□ -0.51
TRBV12-3P01733 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC11.86□□□□□ -0.51
TRBV12-3P01733 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRBV12-3P01733 AL596257.1-201ENST00000641463 2694 ntBASIC11.86□□□□□ -0.51
TRBV12-3P01733 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC11.86□□□□□ -0.51
TRBV12-3P01733 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRBV12-3P01733 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC11.86□□□□□ -0.51
TRBV12-3P01733 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC11.86□□□□□ -0.51
TRBV12-3P01733 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRBV12-3P01733 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRBV12-3P01733 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRBV12-3P01733 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRBV12-3P01733 RER1-203ENST00000378513 3000 ntTSL 3 BASIC11.86□□□□□ -0.51
TRBV12-3P01733 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRBV12-3P01733 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRBV12-3P01733 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRBV12-3P01733 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRBV12-3P01733 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRBV12-3P01733 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
TRBV12-3P01733 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC11.86□□□□□ -0.51
TRBV12-3P01733 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRBV12-3P01733 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRBV12-3P01733 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
TRBV12-3P01733 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
TRBV12-3P01733 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC11.86□□□□□ -0.51
TRBV12-3P01733 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
TRBV12-3P01733 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC11.86□□□□□ -0.51
TRBV12-3P01733 INE1-201ENST00000456273 945 ntBASIC11.86□□□□□ -0.51
TRBV12-3P01733 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC11.86□□□□□ -0.51
TRBV12-3P01733 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
TRBV12-3P01733 AC004066.1-201ENST00000502488 802 ntBASIC11.86□□□□□ -0.51
TRBV12-3P01733 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRBV12-3P01733 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC11.86□□□□□ -0.51
TRBV12-3P01733 COQ6-210ENST00000554920 649 ntTSL 3 BASIC11.86□□□□□ -0.51
TRBV12-3P01733 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC11.86□□□□□ -0.51
TRBV12-3P01733 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC11.86□□□□□ -0.51
TRBV12-3P01733 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC11.86□□□□□ -0.51
TRBV12-3P01733 AC093813.1-201ENST00000605066 256 ntBASIC11.86□□□□□ -0.51
TRBV12-3P01733 AC005252.2-201ENST00000624630 1141 ntBASIC11.86□□□□□ -0.51
TRBV12-3P01733 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms