Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GGPS1O95749 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.17■□□□□ 0.34
GGPS1O95749 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.17■□□□□ 0.34
GGPS1O95749 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GGPS1O95749 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GGPS1O95749 AC099548.2-209ENST00000480264 625 ntBASIC17.17■□□□□ 0.34
GGPS1O95749 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GGPS1O95749 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GGPS1O95749 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.17■□□□□ 0.34
GGPS1O95749 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.17■□□□□ 0.34
GGPS1O95749 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.17■□□□□ 0.34
GGPS1O95749 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GGPS1O95749 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
GGPS1O95749 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GGPS1O95749 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GGPS1O95749 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
GGPS1O95749 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.17■□□□□ 0.34
GGPS1O95749 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GGPS1O95749 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GGPS1O95749 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.17■□□□□ 0.34
GGPS1O95749 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.17■□□□□ 0.34
GGPS1O95749 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GGPS1O95749 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GGPS1O95749 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GGPS1O95749 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GGPS1O95749 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.17■□□□□ 0.34
GGPS1O95749 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GGPS1O95749 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
GGPS1O95749 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.17■□□□□ 0.34
GGPS1O95749 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GGPS1O95749 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GGPS1O95749 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GGPS1O95749 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GGPS1O95749 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
GGPS1O95749 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GGPS1O95749 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
GGPS1O95749 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
GGPS1O95749 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
GGPS1O95749 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GGPS1O95749 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.16■□□□□ 0.34
GGPS1O95749 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.16■□□□□ 0.34
GGPS1O95749 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.16■□□□□ 0.34
GGPS1O95749 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GGPS1O95749 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GGPS1O95749 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
GGPS1O95749 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GGPS1O95749 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GGPS1O95749 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.16■□□□□ 0.34
GGPS1O95749 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.16■□□□□ 0.34
GGPS1O95749 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.16■□□□□ 0.34
GGPS1O95749 AC022616.1-201ENST00000518688 554 ntBASIC17.16■□□□□ 0.34
GGPS1O95749 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.16■□□□□ 0.34
GGPS1O95749 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.16■□□□□ 0.34
GGPS1O95749 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
GGPS1O95749 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.16■□□□□ 0.34
GGPS1O95749 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.16■□□□□ 0.34
GGPS1O95749 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.16■□□□□ 0.34
GGPS1O95749 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.16■□□□□ 0.34
GGPS1O95749 AC243960.2-201ENST00000600996 747 ntBASIC17.16■□□□□ 0.34
GGPS1O95749 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.16■□□□□ 0.34
GGPS1O95749 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.16■□□□□ 0.34
GGPS1O95749 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.16■□□□□ 0.34
GGPS1O95749 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
GGPS1O95749 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
GGPS1O95749 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
GGPS1O95749 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GGPS1O95749 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GGPS1O95749 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
GGPS1O95749 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GGPS1O95749 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GGPS1O95749 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GGPS1O95749 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GGPS1O95749 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
GGPS1O95749 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GGPS1O95749 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GGPS1O95749 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.15■□□□□ 0.34
GGPS1O95749 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.15■□□□□ 0.34
GGPS1O95749 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
GGPS1O95749 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GGPS1O95749 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
GGPS1O95749 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GGPS1O95749 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.15■□□□□ 0.34
GGPS1O95749 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GGPS1O95749 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GGPS1O95749 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GGPS1O95749 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
GGPS1O95749 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
GGPS1O95749 HOMER2P2-201ENST00000451621 847 ntBASIC17.15■□□□□ 0.34
GGPS1O95749 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.15■□□□□ 0.34
GGPS1O95749 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GGPS1O95749 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.15■□□□□ 0.34
GGPS1O95749 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.15■□□□□ 0.34
GGPS1O95749 AC244093.1-201ENST00000610837 814 ntBASIC17.15■□□□□ 0.34
GGPS1O95749 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.15■□□□□ 0.34
GGPS1O95749 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.15■□□□□ 0.34
GGPS1O95749 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GGPS1O95749 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GGPS1O95749 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GGPS1O95749 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.15■□□□□ 0.34
GGPS1O95749 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms