Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
CDH16O75309 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.58■□□□□ 0.08
CDH16O75309 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDH16O75309 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.58■□□□□ 0.08
CDH16O75309 AC007787.1-201ENST00000588095 1583 ntBASIC15.58■□□□□ 0.08
CDH16O75309 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH16O75309 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CDH16O75309 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH16O75309 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CDH16O75309 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH16O75309 AL359881.3-201ENST00000602640 1721 ntBASIC15.57■□□□□ 0.08
CDH16O75309 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH16O75309 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH16O75309 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.57■□□□□ 0.08
CDH16O75309 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH16O75309 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
CDH16O75309 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH16O75309 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH16O75309 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CDH16O75309 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
CDH16O75309 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH16O75309 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH16O75309 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH16O75309 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH16O75309 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CDH16O75309 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
CDH16O75309 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH16O75309 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CDH16O75309 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CDH16O75309 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.57■□□□□ 0.08
CDH16O75309 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.57■□□□□ 0.08
CDH16O75309 AC007967.2-201ENST00000432613 625 ntBASIC15.57■□□□□ 0.08
CDH16O75309 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.57■□□□□ 0.08
CDH16O75309 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.57■□□□□ 0.08
CDH16O75309 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.57■□□□□ 0.08
CDH16O75309 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH16O75309 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.57■□□□□ 0.08
CDH16O75309 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.57■□□□□ 0.08
CDH16O75309 AC243562.1-201ENST00000560672 389 ntBASIC15.57■□□□□ 0.08
CDH16O75309 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.57■□□□□ 0.08
CDH16O75309 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.57■□□□□ 0.08
CDH16O75309 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH16O75309 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH16O75309 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CDH16O75309 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH16O75309 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.57■□□□□ 0.08
CDH16O75309 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH16O75309 AP3S2-216ENST00000617003 1561 ntBASIC15.57■□□□□ 0.08
CDH16O75309 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH16O75309 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH16O75309 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.57■□□□□ 0.08
CDH16O75309 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.57■□□□□ 0.08
CDH16O75309 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.57■□□□□ 0.08
CDH16O75309 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.57■□□□□ 0.08
CDH16O75309 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH16O75309 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CDH16O75309 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CDH16O75309 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.56■□□□□ 0.08
CDH16O75309 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH16O75309 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH16O75309 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CDH16O75309 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CDH16O75309 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH16O75309 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH16O75309 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH16O75309 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH16O75309 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH16O75309 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH16O75309 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH16O75309 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH16O75309 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
CDH16O75309 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH16O75309 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CDH16O75309 AC104457.1-201ENST00000401024 814 ntBASIC15.56■□□□□ 0.08
CDH16O75309 AP000347.1-202ENST00000435868 847 ntBASIC15.56■□□□□ 0.08
CDH16O75309 SPCS2P4-201ENST00000436160 681 ntBASIC15.56■□□□□ 0.08
CDH16O75309 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.56■□□□□ 0.08
CDH16O75309 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH16O75309 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.56■□□□□ 0.08
CDH16O75309 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.56■□□□□ 0.08
CDH16O75309 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.56■□□□□ 0.08
CDH16O75309 LINC01225-203ENST00000563550 1244 ntBASIC15.56■□□□□ 0.08
CDH16O75309 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.56■□□□□ 0.08
CDH16O75309 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.56■□□□□ 0.08
CDH16O75309 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH16O75309 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH16O75309 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CDH16O75309 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.56■□□□□ 0.08
CDH16O75309 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.56■□□□□ 0.08
CDH16O75309 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.56■□□□□ 0.08
CDH16O75309 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.56■□□□□ 0.08
CDH16O75309 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH16O75309 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH16O75309 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH16O75309 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH16O75309 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH16O75309 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH16O75309 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH16O75309 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH16O75309 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms