Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEF11O60813 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.52■□□□□ 0.08
PRAMEF11O60813 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEF11O60813 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEF11O60813 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
PRAMEF11O60813 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEF11O60813 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.52■□□□□ 0.08
PRAMEF11O60813 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PRAMEF11O60813 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PRAMEF11O60813 AC005229.1-201ENST00000392885 409 ntBASIC15.52■□□□□ 0.08
PRAMEF11O60813 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.52■□□□□ 0.08
PRAMEF11O60813 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEF11O60813 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.52■□□□□ 0.08
PRAMEF11O60813 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.52■□□□□ 0.08
PRAMEF11O60813 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.52■□□□□ 0.08
PRAMEF11O60813 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEF11O60813 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.52■□□□□ 0.08
PRAMEF11O60813 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.52■□□□□ 0.08
PRAMEF11O60813 DUX4L47-201ENST00000566374 394 ntBASIC15.52■□□□□ 0.08
PRAMEF11O60813 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEF11O60813 BTNL10-201ENST00000595971 695 ntBASIC15.52■□□□□ 0.08
PRAMEF11O60813 AC233724.13-201ENST00000598383 410 ntBASIC15.52■□□□□ 0.08
PRAMEF11O60813 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.52■□□□□ 0.07
PRAMEF11O60813 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
PRAMEF11O60813 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
PRAMEF11O60813 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRAMEF11O60813 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRAMEF11O60813 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PRAMEF11O60813 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRAMEF11O60813 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PRAMEF11O60813 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.52■□□□□ 0.07
PRAMEF11O60813 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.52■□□□□ 0.07
PRAMEF11O60813 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRAMEF11O60813 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRAMEF11O60813 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRAMEF11O60813 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRAMEF11O60813 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.52■□□□□ 0.07
PRAMEF11O60813 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
PRAMEF11O60813 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 AC006058.4-201ENST00000624016 1670 ntBASIC15.51■□□□□ 0.07
PRAMEF11O60813 ACE3P-201ENST00000423435 1973 ntBASIC15.51■□□□□ 0.07
PRAMEF11O60813 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.51■□□□□ 0.07
PRAMEF11O60813 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.51■□□□□ 0.07
PRAMEF11O60813 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.51■□□□□ 0.07
PRAMEF11O60813 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.51■□□□□ 0.07
PRAMEF11O60813 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
PRAMEF11O60813 AL137783.1-201ENST00000623494 1896 ntBASIC15.51■□□□□ 0.07
PRAMEF11O60813 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
PRAMEF11O60813 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
PRAMEF11O60813 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.51■□□□□ 0.07
PRAMEF11O60813 EIF3FP3-201ENST00000434851 1086 ntBASIC15.51■□□□□ 0.07
PRAMEF11O60813 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 AL355864.2-201ENST00000447420 863 ntBASIC15.51■□□□□ 0.07
PRAMEF11O60813 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.51■□□□□ 0.07
PRAMEF11O60813 AC106760.1-201ENST00000508690 800 ntBASIC15.51■□□□□ 0.07
PRAMEF11O60813 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.51■□□□□ 0.07
PRAMEF11O60813 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.51■□□□□ 0.07
PRAMEF11O60813 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.51■□□□□ 0.07
PRAMEF11O60813 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
PRAMEF11O60813 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.51■□□□□ 0.07
PRAMEF11O60813 AL603764.1-201ENST00000636452 321 ntBASIC15.51■□□□□ 0.07
PRAMEF11O60813 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 LRRC59-203ENST00000576448 1531 ntBASIC15.51■□□□□ 0.07
PRAMEF11O60813 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.51■□□□□ 0.07
PRAMEF11O60813 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.51■□□□□ 0.07
PRAMEF11O60813 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF11O60813 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms