Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTNND1O60716 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.82■□□□□ 0.44
CTNND1O60716 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.82■□□□□ 0.44
CTNND1O60716 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.82■□□□□ 0.44
CTNND1O60716 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTNND1O60716 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTNND1O60716 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTNND1O60716 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTNND1O60716 AC092127.1-201ENST00000567093 3455 ntBASIC17.82■□□□□ 0.44
CTNND1O60716 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTNND1O60716 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTNND1O60716 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CTNND1O60716 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CTNND1O60716 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.82■□□□□ 0.44
CTNND1O60716 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CTNND1O60716 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.82■□□□□ 0.44
CTNND1O60716 AC105129.2-201ENST00000559536 390 ntBASIC17.82■□□□□ 0.44
CTNND1O60716 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.82■□□□□ 0.44
CTNND1O60716 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.82■□□□□ 0.44
CTNND1O60716 AC004466.1-201ENST00000599515 1080 ntBASIC17.82■□□□□ 0.44
CTNND1O60716 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTNND1O60716 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTNND1O60716 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.82■□□□□ 0.44
CTNND1O60716 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTNND1O60716 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CTNND1O60716 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTNND1O60716 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTNND1O60716 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTNND1O60716 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CTNND1O60716 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTNND1O60716 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTNND1O60716 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTNND1O60716 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTNND1O60716 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CTNND1O60716 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTNND1O60716 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.82■□□□□ 0.44
CTNND1O60716 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
CTNND1O60716 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTNND1O60716 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTNND1O60716 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.81■□□□□ 0.44
CTNND1O60716 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTNND1O60716 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
CTNND1O60716 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTNND1O60716 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CTNND1O60716 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTNND1O60716 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CTNND1O60716 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTNND1O60716 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTNND1O60716 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTNND1O60716 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTNND1O60716 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTNND1O60716 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.81■□□□□ 0.44
CTNND1O60716 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTNND1O60716 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CTNND1O60716 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.81■□□□□ 0.44
CTNND1O60716 AL008707.1-201ENST00000422498 534 ntBASIC17.81■□□□□ 0.44
CTNND1O60716 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.81■□□□□ 0.44
CTNND1O60716 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.81■□□□□ 0.44
CTNND1O60716 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.81■□□□□ 0.44
CTNND1O60716 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTNND1O60716 CHMP4BP1-201ENST00000556017 588 ntBASIC17.81■□□□□ 0.44
CTNND1O60716 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTNND1O60716 AC079328.1-201ENST00000560358 952 ntBASIC17.81■□□□□ 0.44
CTNND1O60716 RN7SL190P-201ENST00000582519 257 ntBASIC17.81■□□□□ 0.44
CTNND1O60716 AL023803.2-201ENST00000620080 638 ntBASIC17.81■□□□□ 0.44
CTNND1O60716 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.81■□□□□ 0.44
CTNND1O60716 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTNND1O60716 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.81■□□□□ 0.44
CTNND1O60716 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.81■□□□□ 0.44
CTNND1O60716 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CTNND1O60716 AP003680.1-201ENST00000598970 3660 ntBASIC17.81■□□□□ 0.44
CTNND1O60716 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTNND1O60716 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CTNND1O60716 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTNND1O60716 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
CTNND1O60716 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CTNND1O60716 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CTNND1O60716 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.81■□□□□ 0.44
CTNND1O60716 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CTNND1O60716 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CTNND1O60716 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.81■□□□□ 0.44
CTNND1O60716 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.81■□□□□ 0.44
CTNND1O60716 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.81■□□□□ 0.44
CTNND1O60716 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTNND1O60716 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTNND1O60716 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTNND1O60716 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
CTNND1O60716 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
CTNND1O60716 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
CTNND1O60716 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CTNND1O60716 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTNND1O60716 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.8■□□□□ 0.44
CTNND1O60716 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.8■□□□□ 0.44
CTNND1O60716 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTNND1O60716 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
CTNND1O60716 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTNND1O60716 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTNND1O60716 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTNND1O60716 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.8■□□□□ 0.44
CTNND1O60716 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms