Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZIC3O60481 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ZIC3O60481 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZIC3O60481 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
ZIC3O60481 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZIC3O60481 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
ZIC3O60481 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.77□□□□□ -0.21
ZIC3O60481 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ZIC3O60481 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.77□□□□□ -0.21
ZIC3O60481 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ZIC3O60481 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.21
ZIC3O60481 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
ZIC3O60481 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.77□□□□□ -0.21
ZIC3O60481 C2orf27AP3-201ENST00000434123 579 ntBASIC13.77□□□□□ -0.21
ZIC3O60481 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
ZIC3O60481 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
ZIC3O60481 RPL7P3-201ENST00000441388 714 ntBASIC13.77□□□□□ -0.21
ZIC3O60481 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.77□□□□□ -0.21
ZIC3O60481 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
ZIC3O60481 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
ZIC3O60481 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.77□□□□□ -0.21
ZIC3O60481 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.77□□□□□ -0.21
ZIC3O60481 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
ZIC3O60481 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
ZIC3O60481 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
ZIC3O60481 AP000812.2-201ENST00000538934 718 ntBASIC13.77□□□□□ -0.21
ZIC3O60481 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZIC3O60481 MIR4259-201ENST00000584466 101 ntBASIC13.77□□□□□ -0.21
ZIC3O60481 AL354718.3-201ENST00000616414 581 ntBASIC13.77□□□□□ -0.21
ZIC3O60481 CR382287.1-201ENST00000623954 586 ntBASIC13.77□□□□□ -0.21
ZIC3O60481 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.77□□□□□ -0.21
ZIC3O60481 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ZIC3O60481 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.77□□□□□ -0.21
ZIC3O60481 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.77□□□□□ -0.21
ZIC3O60481 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
ZIC3O60481 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZIC3O60481 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZIC3O60481 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
ZIC3O60481 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
ZIC3O60481 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ZIC3O60481 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ZIC3O60481 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC3O60481 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.76□□□□□ -0.21
ZIC3O60481 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.76□□□□□ -0.21
ZIC3O60481 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
ZIC3O60481 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
ZIC3O60481 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.76□□□□□ -0.21
ZIC3O60481 REXO1L2P-201ENST00000425429 2069 ntBASIC13.76□□□□□ -0.21
ZIC3O60481 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC3O60481 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC3O60481 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC3O60481 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
ZIC3O60481 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.76□□□□□ -0.21
ZIC3O60481 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
ZIC3O60481 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.76□□□□□ -0.21
ZIC3O60481 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC3O60481 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC3O60481 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC3O60481 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC3O60481 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC3O60481 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC3O60481 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
ZIC3O60481 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.76□□□□□ -0.21
ZIC3O60481 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.76□□□□□ -0.21
ZIC3O60481 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC3O60481 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC3O60481 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC3O60481 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC3O60481 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC3O60481 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC3O60481 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC3O60481 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC3O60481 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.76□□□□□ -0.21
ZIC3O60481 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC3O60481 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
ZIC3O60481 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC3O60481 CNN2P8-201ENST00000421872 913 ntBASIC13.76□□□□□ -0.21
ZIC3O60481 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.76□□□□□ -0.21
ZIC3O60481 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.76□□□□□ -0.21
ZIC3O60481 KLF2P4-201ENST00000451959 1225 ntBASIC13.76□□□□□ -0.21
ZIC3O60481 CTBP2P5-201ENST00000454986 1264 ntBASIC13.76□□□□□ -0.21
ZIC3O60481 AC119751.2-201ENST00000504529 210 ntBASIC13.76□□□□□ -0.21
ZIC3O60481 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC3O60481 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.76□□□□□ -0.21
ZIC3O60481 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.76□□□□□ -0.21
ZIC3O60481 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.76□□□□□ -0.21
ZIC3O60481 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
ZIC3O60481 AL603764.1-201ENST00000636452 321 ntBASIC13.76□□□□□ -0.21
ZIC3O60481 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
ZIC3O60481 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
ZIC3O60481 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.76□□□□□ -0.21
ZIC3O60481 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
ZIC3O60481 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC3O60481 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC3O60481 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC3O60481 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
ZIC3O60481 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
ZIC3O60481 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC3O60481 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.76□□□□□ -0.21
ZIC3O60481 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms