Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.93■□□□□ 0.62
SMARCA5O60264 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCA5O60264 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SMARCA5O60264 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SMARCA5O60264 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.93■□□□□ 0.62
SMARCA5O60264 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCA5O60264 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCA5O60264 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCA5O60264 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCA5O60264 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCA5O60264 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCA5O60264 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCA5O60264 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SMARCA5O60264 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
SMARCA5O60264 AL391825.1-201ENST00000457671 1364 ntBASIC18.93■□□□□ 0.62
SMARCA5O60264 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCA5O60264 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCA5O60264 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCA5O60264 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.92■□□□□ 0.62
SMARCA5O60264 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCA5O60264 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCA5O60264 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCA5O60264 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC18.92■□□□□ 0.62
SMARCA5O60264 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCA5O60264 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
SMARCA5O60264 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCA5O60264 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC18.92■□□□□ 0.62
SMARCA5O60264 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SMARCA5O60264 GPI-205ENST00000586425 1799 ntTSL 5 BASIC18.92■□□□□ 0.62
SMARCA5O60264 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCA5O60264 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCA5O60264 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCA5O60264 AC087499.6-201ENST00000411576 835 ntBASIC18.92■□□□□ 0.62
SMARCA5O60264 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.92■□□□□ 0.62
SMARCA5O60264 HLA-K-203ENST00000430151 1046 ntBASIC18.92■□□□□ 0.62
SMARCA5O60264 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCA5O60264 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.92■□□□□ 0.62
SMARCA5O60264 CRB3P1-201ENST00000449338 276 ntBASIC18.92■□□□□ 0.62
SMARCA5O60264 AC004066.1-201ENST00000502488 802 ntBASIC18.92■□□□□ 0.62
SMARCA5O60264 AP001582.1-201ENST00000525856 295 ntBASIC18.92■□□□□ 0.62
SMARCA5O60264 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCA5O60264 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.92■□□□□ 0.62
SMARCA5O60264 TP53TG3HP-202ENST00000569755 579 ntBASIC18.92■□□□□ 0.62
SMARCA5O60264 AC140912.1-201ENST00000577171 1054 ntBASIC18.92■□□□□ 0.62
SMARCA5O60264 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCA5O60264 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCA5O60264 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCA5O60264 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCA5O60264 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC18.92■□□□□ 0.62
SMARCA5O60264 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCA5O60264 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCA5O60264 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCA5O60264 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCA5O60264 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SMARCA5O60264 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SMARCA5O60264 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC18.92■□□□□ 0.62
SMARCA5O60264 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCA5O60264 KRT8P22-201ENST00000562317 1415 ntBASIC18.91■□□□□ 0.62
SMARCA5O60264 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.91■□□□□ 0.62
SMARCA5O60264 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCA5O60264 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC18.91■□□□□ 0.62
SMARCA5O60264 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SMARCA5O60264 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCA5O60264 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SMARCA5O60264 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC18.91■□□□□ 0.62
SMARCA5O60264 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SMARCA5O60264 USP35-204ENST00000530267 2419 ntTSL 2 BASIC18.91■□□□□ 0.62
SMARCA5O60264 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCA5O60264 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.91■□□□□ 0.62
SMARCA5O60264 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCA5O60264 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCA5O60264 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCA5O60264 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCA5O60264 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SMARCA5O60264 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCA5O60264 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCA5O60264 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCA5O60264 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.91■□□□□ 0.62
SMARCA5O60264 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCA5O60264 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SMARCA5O60264 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.91■□□□□ 0.62
SMARCA5O60264 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.91■□□□□ 0.62
SMARCA5O60264 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.91■□□□□ 0.62
SMARCA5O60264 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.91■□□□□ 0.62
SMARCA5O60264 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.91■□□□□ 0.62
SMARCA5O60264 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCA5O60264 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCA5O60264 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC18.91■□□□□ 0.62
SMARCA5O60264 AL360270.3-201ENST00000609118 1348 ntBASIC18.91■□□□□ 0.62
SMARCA5O60264 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCA5O60264 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCA5O60264 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC18.91■□□□□ 0.62
SMARCA5O60264 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.91■□□□□ 0.62
SMARCA5O60264 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCA5O60264 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCA5O60264 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCA5O60264 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.9■□□□□ 0.62
SMARCA5O60264 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCA5O60264 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SMARCA5O60264 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms