Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
TRIM38O00635 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM38O00635 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM38O00635 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM38O00635 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.52■□□□□ 0.07
TRIM38O00635 REXO1L6P-201ENST00000603433 1515 ntBASIC15.52■□□□□ 0.07
TRIM38O00635 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM38O00635 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
TRIM38O00635 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM38O00635 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM38O00635 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.52■□□□□ 0.07
TRIM38O00635 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
TRIM38O00635 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
TRIM38O00635 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM38O00635 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM38O00635 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM38O00635 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM38O00635 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM38O00635 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM38O00635 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM38O00635 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM38O00635 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM38O00635 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM38O00635 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM38O00635 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM38O00635 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM38O00635 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TRIM38O00635 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRIM38O00635 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM38O00635 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.51■□□□□ 0.07
TRIM38O00635 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM38O00635 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.51■□□□□ 0.07
TRIM38O00635 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.51■□□□□ 0.07
TRIM38O00635 AC243562.2-201ENST00000561247 970 ntBASIC15.51■□□□□ 0.07
TRIM38O00635 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM38O00635 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM38O00635 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.51■□□□□ 0.07
TRIM38O00635 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.51■□□□□ 0.07
TRIM38O00635 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TRIM38O00635 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRIM38O00635 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM38O00635 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRIM38O00635 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM38O00635 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM38O00635 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM38O00635 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TRIM38O00635 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM38O00635 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM38O00635 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRIM38O00635 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRIM38O00635 SNX18-202ENST00000343017 3140 ntBASIC15.5■□□□□ 0.07
TRIM38O00635 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.5■□□□□ 0.07
TRIM38O00635 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM38O00635 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM38O00635 AC018665.1-201ENST00000622927 1362 ntBASIC15.5■□□□□ 0.07
TRIM38O00635 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM38O00635 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM38O00635 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM38O00635 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRIM38O00635 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM38O00635 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM38O00635 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
TRIM38O00635 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRIM38O00635 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM38O00635 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM38O00635 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
TRIM38O00635 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM38O00635 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM38O00635 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM38O00635 BOLA2P3-201ENST00000404566 256 ntBASIC15.5■□□□□ 0.07
TRIM38O00635 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.5■□□□□ 0.07
TRIM38O00635 BNIP3P42-201ENST00000454982 569 ntBASIC15.5■□□□□ 0.07
TRIM38O00635 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.5■□□□□ 0.07
TRIM38O00635 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.5■□□□□ 0.07
TRIM38O00635 AC104989.1-201ENST00000519711 778 ntBASIC15.5■□□□□ 0.07
TRIM38O00635 SLC25A47P1-201ENST00000531577 414 ntBASIC15.5■□□□□ 0.07
TRIM38O00635 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TRIM38O00635 BNIP3P29-201ENST00000598302 571 ntBASIC15.5■□□□□ 0.07
TRIM38O00635 AC011447.5-201ENST00000616168 564 ntBASIC15.5■□□□□ 0.07
TRIM38O00635 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM38O00635 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRIM38O00635 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
TRIM38O00635 KRT8P22-201ENST00000562317 1415 ntBASIC15.5■□□□□ 0.07
TRIM38O00635 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM38O00635 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM38O00635 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.5■□□□□ 0.07
TRIM38O00635 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM38O00635 AC026748.1-201ENST00000624349 3251 ntBASIC15.49■□□□□ 0.07
TRIM38O00635 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TRIM38O00635 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM38O00635 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM38O00635 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM38O00635 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM38O00635 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM38O00635 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM38O00635 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM38O00635 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.49■□□□□ 0.07
TRIM38O00635 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM38O00635 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.49■□□□□ 0.07
TRIM38O00635 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms