Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
UPK1AO00322 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
UPK1AO00322 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.58□□□□□ -0.07
UPK1AO00322 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
UPK1AO00322 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
UPK1AO00322 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.58□□□□□ -0.07
UPK1AO00322 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
UPK1AO00322 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.07
UPK1AO00322 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
UPK1AO00322 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.58□□□□□ -0.07
UPK1AO00322 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
UPK1AO00322 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
UPK1AO00322 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
UPK1AO00322 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
UPK1AO00322 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
UPK1AO00322 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
UPK1AO00322 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
UPK1AO00322 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
UPK1AO00322 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
UPK1AO00322 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
UPK1AO00322 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
UPK1AO00322 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
UPK1AO00322 AL133267.1-201ENST00000398220 340 ntBASIC14.58□□□□□ -0.08
UPK1AO00322 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.58□□□□□ -0.08
UPK1AO00322 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.58□□□□□ -0.08
UPK1AO00322 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.58□□□□□ -0.08
UPK1AO00322 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.58□□□□□ -0.08
UPK1AO00322 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.58□□□□□ -0.08
UPK1AO00322 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.58□□□□□ -0.08
UPK1AO00322 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.58□□□□□ -0.08
UPK1AO00322 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.58□□□□□ -0.08
UPK1AO00322 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.58□□□□□ -0.08
UPK1AO00322 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.58□□□□□ -0.08
UPK1AO00322 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
UPK1AO00322 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
UPK1AO00322 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
UPK1AO00322 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
UPK1AO00322 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
UPK1AO00322 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
UPK1AO00322 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
UPK1AO00322 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
UPK1AO00322 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
UPK1AO00322 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
UPK1AO00322 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
UPK1AO00322 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
UPK1AO00322 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
UPK1AO00322 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
UPK1AO00322 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.58□□□□□ -0.08
UPK1AO00322 MTHFR-210ENST00000641407 2387 ntBASIC14.58□□□□□ -0.08
UPK1AO00322 REXO1L2P-201ENST00000425429 2069 ntBASIC14.57□□□□□ -0.08
UPK1AO00322 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.57□□□□□ -0.08
UPK1AO00322 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1AO00322 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1AO00322 BTBD7P1-201ENST00000447253 1453 ntBASIC14.57□□□□□ -0.08
UPK1AO00322 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1AO00322 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1AO00322 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1AO00322 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.57□□□□□ -0.08
UPK1AO00322 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1AO00322 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
UPK1AO00322 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1AO00322 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1AO00322 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.57□□□□□ -0.08
UPK1AO00322 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
UPK1AO00322 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1AO00322 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1AO00322 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1AO00322 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
UPK1AO00322 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1AO00322 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1AO00322 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.57□□□□□ -0.08
UPK1AO00322 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
UPK1AO00322 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.57□□□□□ -0.08
UPK1AO00322 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.57□□□□□ -0.08
UPK1AO00322 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.57□□□□□ -0.08
UPK1AO00322 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.57□□□□□ -0.08
UPK1AO00322 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1AO00322 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.57□□□□□ -0.08
UPK1AO00322 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.57□□□□□ -0.08
UPK1AO00322 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
UPK1AO00322 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1AO00322 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1AO00322 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.57□□□□□ -0.08
UPK1AO00322 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1AO00322 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1AO00322 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1AO00322 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.57□□□□□ -0.08
UPK1AO00322 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1AO00322 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.57□□□□□ -0.08
UPK1AO00322 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1AO00322 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1AO00322 AC138969.3-201ENST00000546612 1459 ntBASIC14.57□□□□□ -0.08
UPK1AO00322 AC138932.2-201ENST00000548268 1459 ntBASIC14.57□□□□□ -0.08
UPK1AO00322 AC126755.4-201ENST00000549796 1459 ntBASIC14.57□□□□□ -0.08
UPK1AO00322 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1AO00322 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1AO00322 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1AO00322 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1AO00322 AL121723.1-201ENST00000445194 1519 ntBASIC14.56□□□□□ -0.08
UPK1AO00322 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms