Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 SIK2-201ENST00000304987 9678 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 ID1-201ENST00000376105 1233 ntBASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 TSPY12P-201ENST00000421279 868 ntBASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 NALT1-201ENST00000429224 738 ntTSL 5 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 BET1L-207ENST00000529614 560 ntTSL 5 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 AC130371.2-201ENST00000619443 611 ntBASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 AC009154.2-201ENST00000621177 724 ntBASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 VPS72-207ENST00000640458 689 ntTSL 5 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 ANXA11-205ENST00000438331 6965 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 FAM160B2-201ENST00000289921 4245 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 DNM3-206ENST00000520906 4454 ntTSL 2 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 EFTUD2-202ENST00000426333 4548 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 LINC01144-201ENST00000626198 1710 ntBASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 ZNF587-201ENST00000339656 6882 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 UBOX5-201ENST00000217173 4631 ntAPPRIS P4 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 WASF2-202ENST00000618852 5676 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 HERC2P10-201ENST00000570209 2393 ntBASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 ZPR1-201ENST00000227322 6566 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 AL391294.1-201ENST00000641352 4068 ntBASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 DHX30-206ENST00000446256 3660 ntAPPRIS P2 TSL 2 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 AC010536.1-201ENST00000538868 2611 ntBASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 KDM6A-214ENST00000621147 2876 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 PSD4-205ENST00000441564 11234 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 AC073335.2-201ENST00000610177 3441 ntBASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 SMIM5-202ENST00000537494 4344 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 PTPRK-203ENST00000368207 4758 ntTSL 5 BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 AL031719.1-201ENST00000623365 2587 ntBASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 TP53TG5-201ENST00000372726 2374 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
CHKB-CPT1BH3BT56 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC8.47□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms