Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 FAM21FP-201ENST00000426241 1131 ntBASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 PHKG1P2-201ENST00000457537 863 ntBASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 SLED1-202ENST00000512051 380 ntBASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 RNA5SP412-201ENST00000516234 123 ntBASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 AL359711.2-201ENST00000563105 872 ntBASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 PDIA3P1-201ENST00000471856 1510 ntBASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 INTS4P2-202ENST00000614726 2019 ntBASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 AC068587.3-201ENST00000526613 355 ntBASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 MIR4525-201ENST00000580000 75 ntBASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 BNIP3P1-202ENST00000550043 1585 ntBASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 TUBB1P2-201ENST00000422712 1306 ntBASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 TUBB1P1-201ENST00000503144 1300 ntBASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 LINC00528-201ENST00000600723 2160 ntBASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.14■□□□□ 0.01
TMX2-CTNND1H3BSU7 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 REXO1L6P-201ENST00000603433 1515 ntBASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 C1QBPP1-201ENST00000400117 770 ntBASIC15.13■□□□□ 0.01
TMX2-CTNND1H3BSU7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms