Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.71■□□□□ 0.43
USP17L11C9JVI0 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.71■□□□□ 0.43
USP17L11C9JVI0 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP17L11C9JVI0 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
USP17L11C9JVI0 AC018735.1-201ENST00000437208 1502 ntBASIC17.71■□□□□ 0.43
USP17L11C9JVI0 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP17L11C9JVI0 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
USP17L11C9JVI0 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
USP17L11C9JVI0 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
USP17L11C9JVI0 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
USP17L11C9JVI0 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.71■□□□□ 0.43
USP17L11C9JVI0 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
USP17L11C9JVI0 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
USP17L11C9JVI0 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
USP17L11C9JVI0 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
USP17L11C9JVI0 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 AC136621.1-201ENST00000624017 2304 ntBASIC17.7■□□□□ 0.42
USP17L11C9JVI0 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 AC020658.6-201ENST00000623564 1870 ntBASIC17.7■□□□□ 0.42
USP17L11C9JVI0 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.7■□□□□ 0.42
USP17L11C9JVI0 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 FNTAP2-201ENST00000430308 634 ntBASIC17.7■□□□□ 0.42
USP17L11C9JVI0 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 IGHJ2P-201ENST00000454480 60 ntBASIC17.7■□□□□ 0.42
USP17L11C9JVI0 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP17L11C9JVI0 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 POM121L8P-201ENST00000417732 1281 ntBASIC17.69■□□□□ 0.42
USP17L11C9JVI0 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 POM121L9P-203ENST00000441984 1285 ntBASIC17.69■□□□□ 0.42
USP17L11C9JVI0 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 ACTG1P17-201ENST00000558391 1119 ntBASIC17.69■□□□□ 0.42
USP17L11C9JVI0 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 RN7SL713P-201ENST00000582127 302 ntBASIC17.69■□□□□ 0.42
USP17L11C9JVI0 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 AL603764.1-201ENST00000636452 321 ntBASIC17.69■□□□□ 0.42
USP17L11C9JVI0 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.69■□□□□ 0.42
USP17L11C9JVI0 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms