Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RCCD1A6NED2 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RCCD1A6NED2 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RCCD1A6NED2 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RCCD1A6NED2 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RCCD1A6NED2 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RCCD1A6NED2 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RCCD1A6NED2 AL157414.3-201ENST00000624276 1954 ntBASIC16.35■□□□□ 0.21
RCCD1A6NED2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RCCD1A6NED2 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RCCD1A6NED2 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RCCD1A6NED2 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RCCD1A6NED2 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RCCD1A6NED2 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.34■□□□□ 0.21
RCCD1A6NED2 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RCCD1A6NED2 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RCCD1A6NED2 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RCCD1A6NED2 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RCCD1A6NED2 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.34■□□□□ 0.21
RCCD1A6NED2 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RCCD1A6NED2 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.34■□□□□ 0.21
RCCD1A6NED2 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
RCCD1A6NED2 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RCCD1A6NED2 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RCCD1A6NED2 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RCCD1A6NED2 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RCCD1A6NED2 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RCCD1A6NED2 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.34■□□□□ 0.21
RCCD1A6NED2 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.34■□□□□ 0.21
RCCD1A6NED2 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.34■□□□□ 0.21
RCCD1A6NED2 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.34■□□□□ 0.21
RCCD1A6NED2 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.34■□□□□ 0.21
RCCD1A6NED2 MIR6069-201ENST00000620069 79 ntBASIC16.34■□□□□ 0.21
RCCD1A6NED2 AC009093.7-201ENST00000623853 1223 ntBASIC16.34■□□□□ 0.21
RCCD1A6NED2 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RCCD1A6NED2 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RCCD1A6NED2 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RCCD1A6NED2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RCCD1A6NED2 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RCCD1A6NED2 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RCCD1A6NED2 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RCCD1A6NED2 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.34■□□□□ 0.21
RCCD1A6NED2 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.34■□□□□ 0.21
RCCD1A6NED2 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RCCD1A6NED2 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RCCD1A6NED2 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.34■□□□□ 0.21
RCCD1A6NED2 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RCCD1A6NED2 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RCCD1A6NED2 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RCCD1A6NED2 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RCCD1A6NED2 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
RCCD1A6NED2 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC16.33■□□□□ 0.21
RCCD1A6NED2 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.21
RCCD1A6NED2 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.33■□□□□ 0.21
RCCD1A6NED2 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RCCD1A6NED2 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RCCD1A6NED2 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RCCD1A6NED2 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.33■□□□□ 0.21
RCCD1A6NED2 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RCCD1A6NED2 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RCCD1A6NED2 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RCCD1A6NED2 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RCCD1A6NED2 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC16.33■□□□□ 0.2
RCCD1A6NED2 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RCCD1A6NED2 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RCCD1A6NED2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RCCD1A6NED2 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.33■□□□□ 0.2
RCCD1A6NED2 TOMM22P5-201ENST00000416399 439 ntBASIC16.33■□□□□ 0.2
RCCD1A6NED2 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.33■□□□□ 0.2
RCCD1A6NED2 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.33■□□□□ 0.2
RCCD1A6NED2 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.33■□□□□ 0.2
RCCD1A6NED2 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.33■□□□□ 0.2
RCCD1A6NED2 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.33■□□□□ 0.2
RCCD1A6NED2 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.33■□□□□ 0.2
RCCD1A6NED2 AL512361.1-201ENST00000554200 418 ntBASIC16.33■□□□□ 0.2
RCCD1A6NED2 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC16.33■□□□□ 0.2
RCCD1A6NED2 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
RCCD1A6NED2 AL390728.6-201ENST00000566446 1246 ntBASIC16.33■□□□□ 0.2
RCCD1A6NED2 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.33■□□□□ 0.2
RCCD1A6NED2 MIR6080-201ENST00000617359 66 ntBASIC16.33■□□□□ 0.2
RCCD1A6NED2 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RCCD1A6NED2 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RCCD1A6NED2 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.33■□□□□ 0.2
RCCD1A6NED2 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.33■□□□□ 0.2
RCCD1A6NED2 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RCCD1A6NED2 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
RCCD1A6NED2 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RCCD1A6NED2 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RCCD1A6NED2 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RCCD1A6NED2 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC16.33■□□□□ 0.2
RCCD1A6NED2 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RCCD1A6NED2 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RCCD1A6NED2 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RCCD1A6NED2 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RCCD1A6NED2 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RCCD1A6NED2 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.32■□□□□ 0.2
RCCD1A6NED2 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RCCD1A6NED2 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RCCD1A6NED2 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RCCD1A6NED2 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms