Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 AC112492.5-201ENST00000421897 457 ntBASIC18.07■□□□□ 0.48
PTPDC1A2A3K4 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.07■□□□□ 0.48
PTPDC1A2A3K4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.07■□□□□ 0.48
PTPDC1A2A3K4 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.07■□□□□ 0.48
PTPDC1A2A3K4 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.07■□□□□ 0.48
PTPDC1A2A3K4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PTPDC1A2A3K4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PTPDC1A2A3K4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.07■□□□□ 0.48
PTPDC1A2A3K4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.07■□□□□ 0.48
PTPDC1A2A3K4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTPDC1A2A3K4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
PTPDC1A2A3K4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.07■□□□□ 0.48
PTPDC1A2A3K4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC18.07■□□□□ 0.48
PTPDC1A2A3K4 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPDC1A2A3K4 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPDC1A2A3K4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPDC1A2A3K4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTPDC1A2A3K4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPDC1A2A3K4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPDC1A2A3K4 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTPDC1A2A3K4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.07■□□□□ 0.48
PTPDC1A2A3K4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
PTPDC1A2A3K4 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTPDC1A2A3K4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPDC1A2A3K4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC18.07■□□□□ 0.48
PTPDC1A2A3K4 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PTPDC1A2A3K4 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTPDC1A2A3K4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PTPDC1A2A3K4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PTPDC1A2A3K4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPDC1A2A3K4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPDC1A2A3K4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPDC1A2A3K4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PTPDC1A2A3K4 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPDC1A2A3K4 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PTPDC1A2A3K4 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPDC1A2A3K4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPDC1A2A3K4 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPDC1A2A3K4 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPDC1A2A3K4 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PTPDC1A2A3K4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC18.06■□□□□ 0.48
PTPDC1A2A3K4 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPDC1A2A3K4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPDC1A2A3K4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PTPDC1A2A3K4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.06■□□□□ 0.48
PTPDC1A2A3K4 AC007274.1-201ENST00000439805 662 ntBASIC18.06■□□□□ 0.48
PTPDC1A2A3K4 ACA64.2-201ENST00000459014 129 ntBASIC18.06■□□□□ 0.48
PTPDC1A2A3K4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPDC1A2A3K4 RAB43P1-201ENST00000561790 589 ntBASIC18.06■□□□□ 0.48
PTPDC1A2A3K4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.06■□□□□ 0.48
PTPDC1A2A3K4 AC017083.2-201ENST00000608069 979 ntBASIC18.06■□□□□ 0.48
PTPDC1A2A3K4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.06■□□□□ 0.48
PTPDC1A2A3K4 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.06■□□□□ 0.48
PTPDC1A2A3K4 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPDC1A2A3K4 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPDC1A2A3K4 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPDC1A2A3K4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PTPDC1A2A3K4 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPDC1A2A3K4 AJ011931.1-201ENST00000618749 2492 ntBASIC18.06■□□□□ 0.48
PTPDC1A2A3K4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPDC1A2A3K4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 AP000845.1-201ENST00000581677 2131 ntBASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 AC079776.1-201ENST00000401540 1152 ntBASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 AC010319.3-201ENST00000597028 470 ntBASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 CICP23-201ENST00000605013 2741 ntBASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC18.05■□□□□ 0.48
PTPDC1A2A3K4 WASH3P-207ENST00000560956 1394 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms