Protein–RNA interactions for Protein: A1X283

SH3PXD2B, SH3 and PX domain-containing protein 2B, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2BA1X283 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 HTR5BP-201ENST00000430851 1154 ntBASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 FAM58CP-201ENST00000435741 640 ntBASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 CEND1P1-201ENST00000451006 455 ntBASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 AL135744.1-201ENST00000565098 629 ntBASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 MIR4469-201ENST00000583919 79 ntBASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 AL596442.2-201ENST00000610240 980 ntBASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 C20orf181-201ENST00000623918 480 ntBASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 AC134684.3-201ENST00000641758 218 ntBASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 ST20-AS1-201ENST00000560255 4223 ntBASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SH3PXD2BA1X283 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 AC126335.2-201ENST00000623362 4637 ntBASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 AL355306.1-201ENST00000415580 579 ntBASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 AC079781.4-201ENST00000641908 219 ntBASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SH3PXD2BA1X283 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SH3PXD2BA1X283 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SH3PXD2BA1X283 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.46□□□□□ -0.09
SH3PXD2BA1X283 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SH3PXD2BA1X283 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.46□□□□□ -0.09
SH3PXD2BA1X283 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.46□□□□□ -0.09
SH3PXD2BA1X283 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.46□□□□□ -0.09
SH3PXD2BA1X283 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms