Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 AL031595.1-201ENST00000623969 4709 ntBASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 AC002056.1-201ENST00000395613 760 ntBASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 AC136604.1-201ENST00000418535 575 ntBASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 UNC93B7-201ENST00000509439 705 ntBASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 RNA5SP415-201ENST00000517246 115 ntBASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 KRT19P2-202ENST00000557173 1012 ntBASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 AL049840.3-201ENST00000602669 611 ntBASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 AP001267.2-201ENST00000532619 2086 ntBASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.27□□□□□ -0.28
TRAV18A0A075B6X5 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV18A0A075B6X5 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV18A0A075B6X5 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV18A0A075B6X5 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV18A0A075B6X5 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV18A0A075B6X5 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
TRAV18A0A075B6X5 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
TRAV18A0A075B6X5 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 EMBP1-201ENST00000458200 901 ntBASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 AC027307.2-201ENST00000591252 911 ntBASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 AC068137.2-201ENST00000605408 478 ntBASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 AL445228.2-201ENST00000605589 952 ntBASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV18A0A075B6X5 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV18A0A075B6X5 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV18A0A075B6X5 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TRAV18A0A075B6X5 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV18A0A075B6X5 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV18A0A075B6X5 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV18A0A075B6X5 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV18A0A075B6X5 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms