Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 AL136379.1-201ENST00000623471 2642 ntBASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 LDHBP1-201ENST00000455730 1119 ntBASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 RN7SL11P-201ENST00000471305 293 ntBASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 RN7SL774P-201ENST00000577467 290 ntBASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 ALOX12P2-203ENST00000570921 1945 ntBASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 AC007787.1-201ENST00000588095 1583 ntBASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 KRT8P29-201ENST00000420409 1371 ntBASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA1Q9Y5H4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 AL136309.1-201ENST00000403917 691 ntBASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 POM121L8P-201ENST00000417732 1281 ntBASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 POM121L9P-203ENST00000441984 1285 ntBASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 CHMP1AP1-201ENST00000445563 662 ntBASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 AC106794.1-201ENST00000506935 792 ntBASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 AC022217.1-201ENST00000521069 738 ntBASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 MIR3907-201ENST00000579424 151 ntBASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 OR10B1P-201ENST00000601666 907 ntBASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 AC073413.1-201ENST00000603927 732 ntBASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 AL645939.5-201ENST00000606834 243 ntBASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 AP001002.3-201ENST00000623482 206 ntBASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 AL645728.2-202ENST00000641679 227 ntBASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 AL662844.4-201ENST00000606367 2838 ntBASIC14.71□□□□□ -0.05
PCDHGA1Q9Y5H4 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms