Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
POLR1DQ9Y2S0 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
POLR1DQ9Y2S0 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.82□□□□□ -0.2
POLR1DQ9Y2S0 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
POLR1DQ9Y2S0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
POLR1DQ9Y2S0 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
POLR1DQ9Y2S0 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
POLR1DQ9Y2S0 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
POLR1DQ9Y2S0 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
POLR1DQ9Y2S0 AC023024.2-201ENST00000623561 1993 ntBASIC13.82□□□□□ -0.2
POLR1DQ9Y2S0 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
POLR1DQ9Y2S0 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
POLR1DQ9Y2S0 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 RPL5P21-201ENST00000404620 815 ntBASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 AC107890.1-201ENST00000422478 521 ntBASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 KLF2P3-201ENST00000451977 1087 ntBASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 HLA-V-204ENST00000476601 1289 ntBASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 HLA-J-203ENST00000494367 1087 ntBASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 AC067863.1-201ENST00000494933 530 ntBASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 AC069120.2-201ENST00000524091 540 ntBASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 KRT8P44-201ENST00000441609 1350 ntBASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 TCAF2P1-201ENST00000291129 2421 ntBASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 AC091951.1-201ENST00000512854 2465 ntBASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
POLR1DQ9Y2S0 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 RPL37AP1-201ENST00000412502 279 ntBASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms