Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
KCMF1Q9P0J7 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
KCMF1Q9P0J7 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
KCMF1Q9P0J7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.59□□□□□ -0.07
KCMF1Q9P0J7 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
KCMF1Q9P0J7 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KCMF1Q9P0J7 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
KCMF1Q9P0J7 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
KCMF1Q9P0J7 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.58□□□□□ -0.07
KCMF1Q9P0J7 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
KCMF1Q9P0J7 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 AC134915.1-201ENST00000426461 574 ntBASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 AC107373.2-201ENST00000607735 490 ntBASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 AL035252.4-201ENST00000624174 288 ntBASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 MROH4P-201ENST00000431302 1578 ntBASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 AC126755.1-201ENST00000525846 6405 ntBASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
KCMF1Q9P0J7 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 AC091951.1-201ENST00000512854 2465 ntBASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 DGCR5-201ENST00000399539 862 ntBASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 AL359711.2-201ENST00000563105 872 ntBASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 AL596325.1-201ENST00000563991 1082 ntBASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 AC120045.2-201ENST00000567334 178 ntBASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 AC124283.3-201ENST00000570869 594 ntBASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 AC239800.4-201ENST00000603712 296 ntBASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 AC093813.1-201ENST00000605066 256 ntBASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 INTS4P2-202ENST00000614726 2019 ntBASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 AL138799.1-201ENST00000448213 1675 ntBASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
KCMF1Q9P0J7 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms