Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 AL118508.1-201ENST00000613502 2345 ntBASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 AL139384.1-201ENST00000612143 3047 ntBASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 DPM3-202ENST00000368399 517 ntBASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 TUBB8P8-201ENST00000458717 1058 ntBASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 RN7SL769P-201ENST00000469386 295 ntBASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 CICP11-201ENST00000434745 2827 ntBASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 MST1L-201ENST00000442552 2185 ntBASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC10Q9NYD6 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 FOS-206ENST00000555347 1280 ntTSL 2 BASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 AC015967.2-201ENST00000624092 234 ntBASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 AC006435.4-201ENST00000625037 234 ntBASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 AC100757.4-201ENST00000626934 759 ntBASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 AL356737.1-201ENST00000634391 234 ntBASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 AC012508.2-201ENST00000567613 1472 ntBASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
HOXC10Q9NYD6 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 PCDHB19P-201ENST00000570871 2371 ntBASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 AL137783.1-201ENST00000623494 1896 ntBASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms