Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC136604.1-201ENST00000418535 575 ntBASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 KLF2P3-201ENST00000451977 1087 ntBASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 AC125807.1-201ENST00000483097 614 ntBASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 MIR4453-201ENST00000584019 89 ntBASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 AJ011931.1-201ENST00000618749 2492 ntBASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 LINC00552-201ENST00000625151 2579 ntBASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 AC107890.1-201ENST00000422478 521 ntBASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 AC105021.1-202ENST00000570572 669 ntBASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 AC097359.3-201ENST00000603982 1210 ntBASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms