Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.71□□□□□ -0.05
CCM2LQ9NUG4 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCM2LQ9NUG4 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.71□□□□□ -0.05
CCM2LQ9NUG4 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CCM2LQ9NUG4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCM2LQ9NUG4 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
CCM2LQ9NUG4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.71□□□□□ -0.05
CCM2LQ9NUG4 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.71□□□□□ -0.05
CCM2LQ9NUG4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCM2LQ9NUG4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CCM2LQ9NUG4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCM2LQ9NUG4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.71□□□□□ -0.05
CCM2LQ9NUG4 CNN2P2-201ENST00000443536 909 ntBASIC14.71□□□□□ -0.05
CCM2LQ9NUG4 CNN2P3-201ENST00000450201 906 ntBASIC14.71□□□□□ -0.05
CCM2LQ9NUG4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.71□□□□□ -0.05
CCM2LQ9NUG4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.71□□□□□ -0.05
CCM2LQ9NUG4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.71□□□□□ -0.05
CCM2LQ9NUG4 RN7SL204P-201ENST00000582831 262 ntBASIC14.71□□□□□ -0.05
CCM2LQ9NUG4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.71□□□□□ -0.05
CCM2LQ9NUG4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.71□□□□□ -0.05
CCM2LQ9NUG4 AL136317.3-201ENST00000618497 906 ntBASIC14.71□□□□□ -0.05
CCM2LQ9NUG4 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCM2LQ9NUG4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCM2LQ9NUG4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.71□□□□□ -0.05
CCM2LQ9NUG4 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCM2LQ9NUG4 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCM2LQ9NUG4 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CCM2LQ9NUG4 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCM2LQ9NUG4 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCM2LQ9NUG4 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCM2LQ9NUG4 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
CCM2LQ9NUG4 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
CCM2LQ9NUG4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCM2LQ9NUG4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.06
CCM2LQ9NUG4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCM2LQ9NUG4 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.06
CCM2LQ9NUG4 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCM2LQ9NUG4 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CCM2LQ9NUG4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 MIR943-201ENST00000401286 94 ntBASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 AC026120.1-201ENST00000611536 926 ntBASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms