Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 RNU1-114P-201ENST00000365297 166 ntBASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 AC005229.1-201ENST00000392885 409 ntBASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 AC022210.1-201ENST00000449856 793 ntBASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 FTH1P14-201ENST00000482930 551 ntBASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 AC022137.2-201ENST00000503482 481 ntBASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 SAMD11P1-201ENST00000571429 661 ntBASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 MST1L-201ENST00000442552 2185 ntBASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 AC093525.8-201ENST00000624099 1342 ntBASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 LINC00554-201ENST00000564841 3011 ntBASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 AC092933.1-201ENST00000393644 945 ntBASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 AC007551.1-201ENST00000457394 519 ntBASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 MIR4259-201ENST00000584466 101 ntBASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 AC244669.2-201ENST00000612320 853 ntBASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 AC148477.4-201ENST00000613430 1793 ntBASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 AC073347.1-201ENST00000421633 2643 ntBASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VAT1LQ9HCJ6 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VAT1LQ9HCJ6 PDIA3P1-201ENST00000471856 1510 ntBASIC17.77■□□□□ 0.44
VAT1LQ9HCJ6 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VAT1LQ9HCJ6 PKD1P5-201ENST00000532415 10291 ntBASIC17.77■□□□□ 0.44
VAT1LQ9HCJ6 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VAT1LQ9HCJ6 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VAT1LQ9HCJ6 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VAT1LQ9HCJ6 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VAT1LQ9HCJ6 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.77■□□□□ 0.44
VAT1LQ9HCJ6 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
VAT1LQ9HCJ6 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
VAT1LQ9HCJ6 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms