Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC026316.1-201ENST00000398900 414 ntBASIC18.4■□□□□ 0.54
RTFDC1Q9BY42 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTFDC1Q9BY42 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC18.4■□□□□ 0.54
RTFDC1Q9BY42 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTFDC1Q9BY42 AC019193.1-201ENST00000506678 823 ntBASIC18.4■□□□□ 0.54
RTFDC1Q9BY42 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC18.4■□□□□ 0.54
RTFDC1Q9BY42 AC009779.1-201ENST00000551138 283 ntBASIC18.4■□□□□ 0.54
RTFDC1Q9BY42 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC18.4■□□□□ 0.54
RTFDC1Q9BY42 PAM16-211ENST00000575848 518 ntTSL 3 BASIC18.4■□□□□ 0.54
RTFDC1Q9BY42 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RTFDC1Q9BY42 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
RTFDC1Q9BY42 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RTFDC1Q9BY42 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC18.4■□□□□ 0.54
RTFDC1Q9BY42 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC18.4■□□□□ 0.54
RTFDC1Q9BY42 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTFDC1Q9BY42 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RTFDC1Q9BY42 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTFDC1Q9BY42 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTFDC1Q9BY42 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTFDC1Q9BY42 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTFDC1Q9BY42 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTFDC1Q9BY42 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTFDC1Q9BY42 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTFDC1Q9BY42 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RTFDC1Q9BY42 MST1L-201ENST00000442552 2185 ntBASIC18.4■□□□□ 0.54
RTFDC1Q9BY42 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RTFDC1Q9BY42 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
RTFDC1Q9BY42 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC18.39■□□□□ 0.54
RTFDC1Q9BY42 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RTFDC1Q9BY42 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.39■□□□□ 0.54
RTFDC1Q9BY42 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RTFDC1Q9BY42 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RTFDC1Q9BY42 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTFDC1Q9BY42 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTFDC1Q9BY42 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RTFDC1Q9BY42 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTFDC1Q9BY42 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RTFDC1Q9BY42 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC18.39■□□□□ 0.53
RTFDC1Q9BY42 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RTFDC1Q9BY42 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC18.39■□□□□ 0.53
RTFDC1Q9BY42 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
RTFDC1Q9BY42 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC18.39■□□□□ 0.53
RTFDC1Q9BY42 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC18.39■□□□□ 0.53
RTFDC1Q9BY42 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.53
RTFDC1Q9BY42 MIR4754-201ENST00000582477 89 ntBASIC18.39■□□□□ 0.53
RTFDC1Q9BY42 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RTFDC1Q9BY42 AC073352.2-201ENST00000609385 439 ntBASIC18.39■□□□□ 0.53
RTFDC1Q9BY42 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RTFDC1Q9BY42 CDK7-214ENST00000626796 358 ntTSL 5 BASIC18.39■□□□□ 0.53
RTFDC1Q9BY42 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC18.39■□□□□ 0.53
RTFDC1Q9BY42 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTFDC1Q9BY42 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RTFDC1Q9BY42 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RTFDC1Q9BY42 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTFDC1Q9BY42 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTFDC1Q9BY42 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
RTFDC1Q9BY42 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTFDC1Q9BY42 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTFDC1Q9BY42 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC18.39■□□□□ 0.53
RTFDC1Q9BY42 AL157414.3-201ENST00000624276 1954 ntBASIC18.39■□□□□ 0.53
RTFDC1Q9BY42 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTFDC1Q9BY42 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTFDC1Q9BY42 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTFDC1Q9BY42 MVK-214ENST00000629016 1591 ntTSL 5 BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 AC008825.2-201ENST00000603374 718 ntBASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 AC103691.2-201ENST00000618824 433 ntBASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC18.38■□□□□ 0.53
RTFDC1Q9BY42 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms