Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.85■□□□□ 0.45
SLF1Q9BQI6 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLF1Q9BQI6 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.85■□□□□ 0.45
SLF1Q9BQI6 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SLF1Q9BQI6 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLF1Q9BQI6 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLF1Q9BQI6 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.85■□□□□ 0.45
SLF1Q9BQI6 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLF1Q9BQI6 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.85■□□□□ 0.45
SLF1Q9BQI6 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.85■□□□□ 0.45
SLF1Q9BQI6 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SLF1Q9BQI6 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLF1Q9BQI6 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLF1Q9BQI6 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.85■□□□□ 0.45
SLF1Q9BQI6 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
SLF1Q9BQI6 AC084364.1-201ENST00000551967 1556 ntBASIC17.85■□□□□ 0.45
SLF1Q9BQI6 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLF1Q9BQI6 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.85■□□□□ 0.45
SLF1Q9BQI6 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.85■□□□□ 0.45
SLF1Q9BQI6 AC009542.2-202ENST00000619004 1067 ntBASIC17.85■□□□□ 0.45
SLF1Q9BQI6 AC138951.2-201ENST00000623455 1161 ntBASIC17.85■□□□□ 0.45
SLF1Q9BQI6 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.85■□□□□ 0.45
SLF1Q9BQI6 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.85■□□□□ 0.45
SLF1Q9BQI6 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.85■□□□□ 0.45
SLF1Q9BQI6 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.85■□□□□ 0.45
SLF1Q9BQI6 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.85■□□□□ 0.45
SLF1Q9BQI6 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLF1Q9BQI6 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLF1Q9BQI6 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLF1Q9BQI6 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 AC127383.1-201ENST00000444697 1800 ntBASIC17.84■□□□□ 0.45
SLF1Q9BQI6 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 AC006001.1-201ENST00000325130 474 ntBASIC17.84■□□□□ 0.45
SLF1Q9BQI6 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 ACTBP8-201ENST00000403258 1108 ntBASIC17.84■□□□□ 0.45
SLF1Q9BQI6 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 NUS1P3-201ENST00000423502 862 ntBASIC17.84■□□□□ 0.45
SLF1Q9BQI6 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 AC114812.1-204ENST00000449669 728 ntBASIC17.84■□□□□ 0.45
SLF1Q9BQI6 AC078819.1-201ENST00000547454 765 ntBASIC17.84■□□□□ 0.45
SLF1Q9BQI6 AC012085.1-201ENST00000548270 765 ntBASIC17.84■□□□□ 0.45
SLF1Q9BQI6 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 DUX4L45-201ENST00000566406 1057 ntBASIC17.84■□□□□ 0.45
SLF1Q9BQI6 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 MIR6869-201ENST00000619434 62 ntBASIC17.84■□□□□ 0.45
SLF1Q9BQI6 AC132938.4-201ENST00000623835 848 ntBASIC17.84■□□□□ 0.45
SLF1Q9BQI6 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.84■□□□□ 0.45
SLF1Q9BQI6 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLF1Q9BQI6 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLF1Q9BQI6 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLF1Q9BQI6 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLF1Q9BQI6 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.83■□□□□ 0.45
SLF1Q9BQI6 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.83■□□□□ 0.45
SLF1Q9BQI6 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
SLF1Q9BQI6 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLF1Q9BQI6 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLF1Q9BQI6 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLF1Q9BQI6 MST1L-201ENST00000442552 2185 ntBASIC17.83■□□□□ 0.45
SLF1Q9BQI6 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.83■□□□□ 0.45
SLF1Q9BQI6 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
SLF1Q9BQI6 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLF1Q9BQI6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SLF1Q9BQI6 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SLF1Q9BQI6 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SLF1Q9BQI6 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
SLF1Q9BQI6 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.83■□□□□ 0.44
SLF1Q9BQI6 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SLF1Q9BQI6 AC023310.1-201ENST00000554836 735 ntBASIC17.83■□□□□ 0.44
SLF1Q9BQI6 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.83■□□□□ 0.44
SLF1Q9BQI6 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.83■□□□□ 0.44
SLF1Q9BQI6 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.83■□□□□ 0.44
SLF1Q9BQI6 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms