Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SNX18Q96RF0 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SNX18Q96RF0 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SNX18Q96RF0 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SNX18Q96RF0 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNX18Q96RF0 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.1□□□□□ -0.15
SNX18Q96RF0 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNX18Q96RF0 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SNX18Q96RF0 MROH4P-201ENST00000431302 1578 ntBASIC14.1□□□□□ -0.15
SNX18Q96RF0 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
SNX18Q96RF0 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SNX18Q96RF0 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNX18Q96RF0 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SNX18Q96RF0 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.1□□□□□ -0.15
SNX18Q96RF0 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SNX18Q96RF0 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SNX18Q96RF0 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SNX18Q96RF0 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SNX18Q96RF0 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.1□□□□□ -0.15
SNX18Q96RF0 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.1□□□□□ -0.15
SNX18Q96RF0 RPL5P21-201ENST00000404620 815 ntBASIC14.1□□□□□ -0.15
SNX18Q96RF0 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.1□□□□□ -0.15
SNX18Q96RF0 AL627223.1-201ENST00000416693 442 ntBASIC14.1□□□□□ -0.15
SNX18Q96RF0 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.1□□□□□ -0.15
SNX18Q96RF0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.1□□□□□ -0.15
SNX18Q96RF0 AC109322.1-201ENST00000524499 1264 ntBASIC14.1□□□□□ -0.15
SNX18Q96RF0 ALG1L8P-201ENST00000533887 760 ntBASIC14.1□□□□□ -0.15
SNX18Q96RF0 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNX18Q96RF0 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.1□□□□□ -0.15
SNX18Q96RF0 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.1□□□□□ -0.15
SNX18Q96RF0 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SNX18Q96RF0 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SNX18Q96RF0 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.1□□□□□ -0.15
SNX18Q96RF0 C18orf15-201ENST00000623680 2534 ntBASIC14.1□□□□□ -0.15
SNX18Q96RF0 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNX18Q96RF0 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SNX18Q96RF0 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNX18Q96RF0 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNX18Q96RF0 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SNX18Q96RF0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNX18Q96RF0 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SNX18Q96RF0 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SNX18Q96RF0 COL6A4P2-202ENST00000504443 2753 ntBASIC14.1□□□□□ -0.15
SNX18Q96RF0 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SNX18Q96RF0 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNX18Q96RF0 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SNX18Q96RF0 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SNX18Q96RF0 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNX18Q96RF0 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SNX18Q96RF0 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SNX18Q96RF0 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNX18Q96RF0 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SNX18Q96RF0 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.09□□□□□ -0.15
SNX18Q96RF0 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SNX18Q96RF0 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNX18Q96RF0 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNX18Q96RF0 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNX18Q96RF0 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNX18Q96RF0 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNX18Q96RF0 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SNX18Q96RF0 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNX18Q96RF0 AP003680.1-201ENST00000598970 3660 ntBASIC14.09□□□□□ -0.15
SNX18Q96RF0 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNX18Q96RF0 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.09□□□□□ -0.15
SNX18Q96RF0 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SNX18Q96RF0 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SNX18Q96RF0 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
SNX18Q96RF0 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SNX18Q96RF0 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNX18Q96RF0 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNX18Q96RF0 AZGP1P1-201ENST00000411909 902 ntBASIC14.09□□□□□ -0.15
SNX18Q96RF0 FAM86GP-201ENST00000448322 971 ntBASIC14.09□□□□□ -0.15
SNX18Q96RF0 HLA-J-203ENST00000494367 1087 ntBASIC14.09□□□□□ -0.15
SNX18Q96RF0 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.09□□□□□ -0.15
SNX18Q96RF0 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.09□□□□□ -0.15
SNX18Q96RF0 AC018529.1-201ENST00000613063 361 ntBASIC14.09□□□□□ -0.15
SNX18Q96RF0 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.09□□□□□ -0.15
SNX18Q96RF0 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SNX18Q96RF0 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.09□□□□□ -0.15
SNX18Q96RF0 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.09□□□□□ -0.15
SNX18Q96RF0 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.09□□□□□ -0.15
SNX18Q96RF0 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SNX18Q96RF0 OR2I1P-209ENST00000641730 5365 ntBASIC14.09□□□□□ -0.15
SNX18Q96RF0 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.09□□□□□ -0.15
SNX18Q96RF0 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SNX18Q96RF0 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNX18Q96RF0 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
SNX18Q96RF0 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNX18Q96RF0 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SNX18Q96RF0 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.09□□□□□ -0.15
SNX18Q96RF0 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SNX18Q96RF0 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.09□□□□□ -0.15
SNX18Q96RF0 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SNX18Q96RF0 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SNX18Q96RF0 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNX18Q96RF0 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNX18Q96RF0 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SNX18Q96RF0 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.15
SNX18Q96RF0 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SNX18Q96RF0 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms