Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 MIR940-201ENST00000401276 94 ntBASIC14.84□□□□□ -0.03
VPS33AQ96AX1 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 AL353705.2-201ENST00000428243 662 ntBASIC14.84□□□□□ -0.03
VPS33AQ96AX1 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 AC105021.1-202ENST00000570572 669 ntBASIC14.84□□□□□ -0.03
VPS33AQ96AX1 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 AC097359.2-201ENST00000604992 2389 ntBASIC14.84□□□□□ -0.03
VPS33AQ96AX1 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.84□□□□□ -0.03
VPS33AQ96AX1 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
VPS33AQ96AX1 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VPS33AQ96AX1 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.83□□□□□ -0.03
VPS33AQ96AX1 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
VPS33AQ96AX1 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.83□□□□□ -0.03
VPS33AQ96AX1 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VPS33AQ96AX1 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
VPS33AQ96AX1 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VPS33AQ96AX1 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS33AQ96AX1 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS33AQ96AX1 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.83□□□□□ -0.04
VPS33AQ96AX1 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
VPS33AQ96AX1 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.83□□□□□ -0.04
VPS33AQ96AX1 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VPS33AQ96AX1 MCCD1P2-201ENST00000423228 335 ntBASIC14.83□□□□□ -0.04
VPS33AQ96AX1 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.83□□□□□ -0.04
VPS33AQ96AX1 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.83□□□□□ -0.04
VPS33AQ96AX1 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.83□□□□□ -0.04
VPS33AQ96AX1 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
VPS33AQ96AX1 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.83□□□□□ -0.04
VPS33AQ96AX1 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
VPS33AQ96AX1 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS33AQ96AX1 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.83□□□□□ -0.04
VPS33AQ96AX1 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms