Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
DDX1Q92499 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.34■□□□□ 0.21
DDX1Q92499 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.34■□□□□ 0.21
DDX1Q92499 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
DDX1Q92499 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
DDX1Q92499 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.34■□□□□ 0.21
DDX1Q92499 AL360270.3-201ENST00000609118 1348 ntBASIC16.34■□□□□ 0.21
DDX1Q92499 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DDX1Q92499 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
DDX1Q92499 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
DDX1Q92499 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
DDX1Q92499 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DDX1Q92499 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
DDX1Q92499 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
DDX1Q92499 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.34■□□□□ 0.21
DDX1Q92499 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DDX1Q92499 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
DDX1Q92499 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DDX1Q92499 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DDX1Q92499 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.34■□□□□ 0.21
DDX1Q92499 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.34■□□□□ 0.21
DDX1Q92499 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.34■□□□□ 0.21
DDX1Q92499 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DDX1Q92499 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
DDX1Q92499 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.33■□□□□ 0.21
DDX1Q92499 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
DDX1Q92499 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
DDX1Q92499 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
DDX1Q92499 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.33■□□□□ 0.21
DDX1Q92499 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
DDX1Q92499 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
DDX1Q92499 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
DDX1Q92499 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DDX1Q92499 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
DDX1Q92499 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.33■□□□□ 0.2
DDX1Q92499 FAM86MP-201ENST00000340703 885 ntBASIC16.33■□□□□ 0.2
DDX1Q92499 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.33■□□□□ 0.2
DDX1Q92499 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.33■□□□□ 0.2
DDX1Q92499 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.33■□□□□ 0.2
DDX1Q92499 AC004066.1-201ENST00000502488 802 ntBASIC16.33■□□□□ 0.2
DDX1Q92499 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.33■□□□□ 0.2
DDX1Q92499 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.33■□□□□ 0.2
DDX1Q92499 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.33■□□□□ 0.2
DDX1Q92499 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.33■□□□□ 0.2
DDX1Q92499 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DDX1Q92499 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DDX1Q92499 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
DDX1Q92499 SLC7A15P-201ENST00000424028 1363 ntBASIC16.33■□□□□ 0.2
DDX1Q92499 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
DDX1Q92499 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
DDX1Q92499 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.33■□□□□ 0.2
DDX1Q92499 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.33■□□□□ 0.2
DDX1Q92499 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DDX1Q92499 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DDX1Q92499 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DDX1Q92499 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
DDX1Q92499 AL157414.3-201ENST00000624276 1954 ntBASIC16.33■□□□□ 0.2
DDX1Q92499 AL390755.1-201ENST00000623716 2027 ntBASIC16.33■□□□□ 0.2
DDX1Q92499 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
DDX1Q92499 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.33■□□□□ 0.2
DDX1Q92499 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
DDX1Q92499 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
DDX1Q92499 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.33■□□□□ 0.2
DDX1Q92499 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.32■□□□□ 0.2
DDX1Q92499 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DDX1Q92499 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.32■□□□□ 0.2
DDX1Q92499 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.32■□□□□ 0.2
DDX1Q92499 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DDX1Q92499 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DDX1Q92499 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DDX1Q92499 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
DDX1Q92499 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.32■□□□□ 0.2
DDX1Q92499 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DDX1Q92499 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.32■□□□□ 0.2
DDX1Q92499 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DDX1Q92499 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DDX1Q92499 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.32■□□□□ 0.2
DDX1Q92499 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
DDX1Q92499 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
DDX1Q92499 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.32■□□□□ 0.2
DDX1Q92499 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
DDX1Q92499 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
DDX1Q92499 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DDX1Q92499 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.32■□□□□ 0.2
DDX1Q92499 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
DDX1Q92499 MEP1AP4-201ENST00000423244 1087 ntBASIC16.32■□□□□ 0.2
DDX1Q92499 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.32■□□□□ 0.2
DDX1Q92499 KRT223P-202ENST00000449164 1292 ntBASIC16.32■□□□□ 0.2
DDX1Q92499 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.32■□□□□ 0.2
DDX1Q92499 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.32■□□□□ 0.2
DDX1Q92499 VDAC1P7-201ENST00000462417 847 ntBASIC16.32■□□□□ 0.2
DDX1Q92499 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.32■□□□□ 0.2
DDX1Q92499 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.32■□□□□ 0.2
DDX1Q92499 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.32■□□□□ 0.2
DDX1Q92499 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.32■□□□□ 0.2
DDX1Q92499 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.32■□□□□ 0.2
DDX1Q92499 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.32■□□□□ 0.2
DDX1Q92499 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.32■□□□□ 0.2
DDX1Q92499 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DDX1Q92499 CICP14-201ENST00000629111 2732 ntBASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms