Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF138Q8WVD3 TPM3P8-201ENST00000330554 643 ntBASIC13.75□□□□□ -0.21
RNF138Q8WVD3 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF138Q8WVD3 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF138Q8WVD3 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF138Q8WVD3 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
RNF138Q8WVD3 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.75□□□□□ -0.21
RNF138Q8WVD3 KLF2P4-201ENST00000451959 1225 ntBASIC13.75□□□□□ -0.21
RNF138Q8WVD3 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF138Q8WVD3 FTLP10-202ENST00000505798 471 ntBASIC13.75□□□□□ -0.21
RNF138Q8WVD3 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.75□□□□□ -0.21
RNF138Q8WVD3 AC104989.1-201ENST00000519711 778 ntBASIC13.75□□□□□ -0.21
RNF138Q8WVD3 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.75□□□□□ -0.21
RNF138Q8WVD3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.75□□□□□ -0.21
RNF138Q8WVD3 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.75□□□□□ -0.21
RNF138Q8WVD3 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
RNF138Q8WVD3 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.75□□□□□ -0.21
RNF138Q8WVD3 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF138Q8WVD3 AC138951.2-201ENST00000623455 1161 ntBASIC13.75□□□□□ -0.21
RNF138Q8WVD3 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.75□□□□□ -0.21
RNF138Q8WVD3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
RNF138Q8WVD3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF138Q8WVD3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF138Q8WVD3 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF138Q8WVD3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.75□□□□□ -0.21
RNF138Q8WVD3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF138Q8WVD3 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF138Q8WVD3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF138Q8WVD3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF138Q8WVD3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF138Q8WVD3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF138Q8WVD3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF138Q8WVD3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.75□□□□□ -0.21
RNF138Q8WVD3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF138Q8WVD3 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF138Q8WVD3 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 CTBP2P5-201ENST00000454986 1264 ntBASIC13.74□□□□□ -0.21
RNF138Q8WVD3 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 AC079316.1-201ENST00000548397 411 ntBASIC13.74□□□□□ -0.21
RNF138Q8WVD3 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 AP005482.1-201ENST00000563722 1273 ntBASIC13.74□□□□□ -0.21
RNF138Q8WVD3 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.74□□□□□ -0.21
RNF138Q8WVD3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF138Q8WVD3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF138Q8WVD3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF138Q8WVD3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF138Q8WVD3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF138Q8WVD3 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.73□□□□□ -0.21
RNF138Q8WVD3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF138Q8WVD3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF138Q8WVD3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF138Q8WVD3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF138Q8WVD3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms