Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 AC241585.1-201ENST00000433527 519 ntBASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 AL121723.1-201ENST00000445194 1519 ntBASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.08■□□□□ 0.17
TRAF3IP1Q8TDR0 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAF3IP1Q8TDR0 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAF3IP1Q8TDR0 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.17
TRAF3IP1Q8TDR0 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
TRAF3IP1Q8TDR0 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
TRAF3IP1Q8TDR0 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.08■□□□□ 0.17
TRAF3IP1Q8TDR0 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
TRAF3IP1Q8TDR0 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.08■□□□□ 0.17
TRAF3IP1Q8TDR0 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRAF3IP1Q8TDR0 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 TOMM22P5-201ENST00000416399 439 ntBASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 AL590560.3-201ENST00000623350 461 ntBASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 AC138969.3-201ENST00000546612 1459 ntBASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 AC138932.2-201ENST00000548268 1459 ntBASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 AC126755.4-201ENST00000549796 1459 ntBASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 MROH4P-201ENST00000431302 1578 ntBASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAF3IP1Q8TDR0 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 AC025181.2-201ENST00000606994 802 ntBASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 AL844908.2-201ENST00000609461 460 ntBASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 AL390754.1-201ENST00000619088 582 ntBASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms