Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 SLC6A6P1-201ENST00000413933 1850 ntBASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 AP000845.1-201ENST00000581677 2131 ntBASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 AC023090.2-201ENST00000625182 2110 ntBASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 FXN-203ENST00000396366 922 ntTSL 2 BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 RBM17P3-201ENST00000417687 1192 ntBASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 AC022616.7-201ENST00000525383 220 ntBASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 USP3-204ENST00000540797 5474 ntTSL 2 BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 PAM16-215ENST00000577031 548 ntTSL 4 BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 AC006557.2-201ENST00000592985 1240 ntBASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 FHL2-212ENST00000607522 759 ntTSL 2 BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
SMIM11BQ8TCY0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms