Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AC063926.2-201ENST00000623766 1308 ntBASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 AC007787.1-201ENST00000588095 1583 ntBASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
PCDH19Q8TAB3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 MEP1AP4-201ENST00000423244 1087 ntBASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 VDAC1P7-201ENST00000462417 847 ntBASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 RRP7BP-205ENST00000566851 833 ntBASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 AC107373.2-201ENST00000607735 490 ntBASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 AC025048.6-201ENST00000634326 1161 ntBASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 SLC7A15P-201ENST00000424028 1363 ntBASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH19Q8TAB3 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 GAPDHP21-201ENST00000450301 1010 ntBASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 AC004066.1-201ENST00000502488 802 ntBASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 AC093004.1-201ENST00000508850 424 ntBASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.85■□□□□ 0.13
PCDH19Q8TAB3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms