Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPEB3Q8NE35 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.49□□□□□ -0.25
CPEB3Q8NE35 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 AC055876.2-201ENST00000531834 546 ntBASIC13.49□□□□□ -0.25
CPEB3Q8NE35 RRP7BP-205ENST00000566851 833 ntBASIC13.49□□□□□ -0.25
CPEB3Q8NE35 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 CHCHD2P3-201ENST00000603038 451 ntBASIC13.49□□□□□ -0.25
CPEB3Q8NE35 AC099568.2-201ENST00000609194 695 ntBASIC13.49□□□□□ -0.25
CPEB3Q8NE35 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 AP002414.2-201ENST00000591780 3365 ntBASIC13.49□□□□□ -0.25
CPEB3Q8NE35 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CPEB3Q8NE35 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 AL353779.1-201ENST00000434793 351 ntBASIC13.48□□□□□ -0.25
CPEB3Q8NE35 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 API5-211ENST00000534695 560 ntTSL 5 BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.48□□□□□ -0.25
CPEB3Q8NE35 AL662799.1-202ENST00000614205 422 ntBASIC13.48□□□□□ -0.25
CPEB3Q8NE35 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms